Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1443 ATGATTATGCCAATTCAATCTTGTATGCACTTTTCATGTCACATTTTTCTGATTTTTTTGTTCTTCCTTGTCCACACAAGCTCACAGTCATTGAATGATCAAGAGCATGCAGTTTTGCTTAAGATAAAGCAATATCTTGAAGACCCTTCTTTCCTCTCCCACTGGAATTCAACTTCCTCTCACTGTTCATGGGCTGAGATTACATGCACCTCTGGCTCGGTTACTTCCCTCACCCTCTCCCATTCCAACATCAACAAAACTATACCACCCTTCACCTGTGACCTCACCAACCTCACACACCTTGACTTCAGCTTCAACCTCATCCCTGGTGACTTCCCCACACCCCTCTACAACTGCTCCAAGTTGGAGTACTTGGATCTTTCGGGTAACAACTTTGATGGCAAGGTTCCTCTTGACATTGACCATTTGGGTGCTAATTTGCAATATCTCAACCTTGGTTCTACCAACTTCCATGGTGGTGTTCCTGCTAGTATTGCAAATTTAAAGCAACTGAGACAGCTTAGACTTCAGTTTTGCTTATTGAATGGCTCTGTTGCTGCTGAGATTGATAGCTTGTCCAATCTTGAGTACTTGGACTTGTCCTCTAACTTCTTGTTTCCCAAATGGAAGTTGCCTTGGAACTTGACCAAGTTCAACAAATTGAAGGTGTTTTATTTGTATGGAACCAACTTGGTTGGGGAAATCCCAGATAACATTGGAGATATGGTGGCTTTGGAGAAGCTGGATGCGTCAAAAAATGGCTTAACTGGAGGAATTCCAAGTGGTTTGTTCTTGCTGAAGAATCTGACCTCACTCTATCTTTTTGAAAATGATCTCTCAGGGGAGATACCAAGTGTGGTTGAGGCATTAAACTTGGTCAACCTTGATCTTGCAAGGAACAATCTCACAGGGAAAATACCAGATGATTTTGGAAAGCTGCAGCAGTTGTCATGGTTGAGTTTGTCTTTGAATAGCTTGTCAGGTGTGATACCAGAAAGCTTAGGCAATCTTCCAGATCTCAGGGATTTTCGCGTGTTTTTCAACAAGTTATCAGGTACTCTTCCTCCTGATTTTGGCCGTTACTCAAAGCTTAAAACCTTTTTGATTGCATCTAATAGTTTTACTGGGAAGTTACCGGAGAACTTGTGCTATCATGGGATGTTACTTAACTTGTCTGTTTATGAGAATAATCTGAGTGGTGAGTTGCCAAAATTTCTTGGAAATTGCAGTAGTTTACTGGACCTGAAAATTCATGAAAATGAGTTTTCTGGTAACATTCCTAGTGGTCTTTGGACATCTTTCAATTTGTCAAATTTCATGGTGAGCCATAATAAGTTCACTGGTGTGCTTCCTGAAAGGCTATCTTGGAATGTTTCGAGGTTTGAGATAAGTTACAATCAGTTTTCTGGTAAAATTCCAAGTGGAGTATCATCATGGACTAATTTGGTAGTGTTTGATGCCAGCAAGAACAATTTCAATGGAAGTATTCCAAAAGAGCTAACAGCTCTTCGTAAGTTAACAACCTTGTTACTTGATCAGAACCAACTCACTGGGGCACTTCCATCAGATATAATATCATGGAAATCCTTGGTAACTCTAAATTTGAGCCAAAACCAACTCTCTGGACAGATTCCTCATGCAATTGGTCAGTTACCTGTCCTTAGTCAGCTTGATCTATCAGAAAATGAACTCTCTGGCCAAGTTCCTTCTCTACCTTCCAGACTCACCAATCTCAATTTGTCTTATAATAATTTGACTGGGAGGATTCAAAGGGAATATGAAAATTCTGTGTTTGCTGGTAGCTTTTTGGGCAATTCTGGTCTTTGTTCTGACAACCCAGCACTGAACCTCGCCTTGTGCAATTCTGGCCTTCAAAGAACAAGCAAGGGCTCATCTTGGTCTATTGGTTCGATTATATGCTTGGCGGTAGTAGCCTTGTTACTGATCCTTCTGGCATCATTCTTGTTTATTAGATTTCAAAGGAAGAGAAAGCACAGATTAGATAACTCTTGGAAGCTCACTTCCTTTCAGAGGGTGAATTTCACAGAATCAACCATTGTATCATCAATGACAGAACAAAACATTATTGGTAGTGGTGGATATGGTACAGTATACCGCATTGATGTTGGTTCAGAATATGTTGCTGTGAAAAAGATTTGGAATAACAGAAAGTTGAACAAGAAGCTTGAGAGCTCCTTCCGTGCAGAAGTTAGAATATTGAGCAACATTCGTCATACCAACATAGTGAAGTTGATGTGTTGTATCTCTAATGAGGATTCTATGCTCCTTGTATATGAGTATCATGAAAATCTCAGCCTAGATAAGTGGCTGCATAAGAATGTTAAGCCAGGTTCAGTCAATAAAGTGGTCCTTGATTGGCCAAAGAGGTTGAAAATAGCAATTGGAATTGCTCAGGGTTTGAGCTACATGCATCATGATTGTTTACCACCTGTTGTTCATAGAGATGTAAAAACAAGCAACATCCTTCTGGATTCTCAATTCAATGCAAAAGTTGCTGATTTTGGACTAGCCAAGTTGTTAATCAAGCCAGAGGAACTTAGCACCATGTCAGCTGTTATTGGCTCATTTGGCTATATTGCTCCAGAATATGTGCAATCAACCAGAGTTAGTGAAAAGGTTGATGTGTTCAGCTTTGGGGTGATCCTATTAGAACTGACAACCGGTAAAGAAGCAAGTTATGGAGACCAACACTCATCTCTTTCAGAGTGGGCGTGGCGTCACATTCTGATTGGAGGCAATGTTGAAGAATTGCTAGACAAAGATGTGGTTGAAGGCAGTTACTTAGATGAAATGTGCAGTGTTTTCAAACTTGGTGTCATGTGCACTGCAACACTACCTACTAGTAGGCCTTCCATGAAGGATGCTCTACAAATATTGCAAAGCTTAGGAGAACCATTATTTTATGGTGAGAAGAACTTTGGCCACTACTATGATGCCATTCCCCTTCTTAAGAGTTCCAAGGAAACTAGATTGCATGTTGATAGTGAATGA 3012 0.4041 MIMPIQSCMHFSCHIFLIFLFFLVHTSSQSLNDQEHAVLLKIKQYLEDPSFLSHWNSTSSHCSWAEITCTSGSVTSLTLSHSNINKTIPPFTCDLTNLTHLDFSFNLIPGDFPTPLYNCSKLEYLDLSGNNFDGKVPLDIDHLGANLQYLNLGSTNFHGGVPASIANLKQLRQLRLQFCLLNGSVAAEIDSLSNLEYLDLSSNFLFPKWKLPWNLTKFNKLKVFYLYGTNLVGEIPDNIGDMVALEKLDASKNGLTGGIPSGLFLLKNLTSLYLFENDLSGEIPSVVEALNLVNLDLARNNLTGKIPDDFGKLQQLSWLSLSLNSLSGVIPESLGNLPDLRDFRVFFNKLSGTLPPDFGRYSKLKTFLIASNSFTGKLPENLCYHGMLLNLSVYENNLSGELPKFLGNCSSLLDLKIHENEFSGNIPSGLWTSFNLSNFMVSHNKFTGVLPERLSWNVSRFEISYNQFSGKIPSGVSSWTNLVVFDASKNNFNGSIPKELTALRKLTTLLLDQNQLTGALPSDIISWKSLVTLNLSQNQLSGQIPHAIGQLPVLSQLDLSENELSGQVPSLPSRLTNLNLSYNNLTGRIQREYENSVFAGSFLGNSGLCSDNPALNLALCNSGLQRTSKGSSWSIGSIICLAVVALLLILLASFLFIRFQRKRKHRLDNSWKLTSFQRVNFTESTIVSSMTEQNIIGSGGYGTVYRIDVGSEYVAVKKIWNNRKLNKKLESSFRAEVRILSNIRHTNIVKLMCCISNEDSMLLVYEYHENLSLDKWLHKNVKPGSVNKVVLDWPKRLKIAIGIAQGLSYMHHDCLPPVVHRDVKTSNILLDSQFNAKVADFGLAKLLIKPEELSTMSAVIGSFGYIAPEYVQSTRVSEKVDVFSFGVILLELTTGKEASYGDQHSSLSEWAWRHILIGGNVEELLDKDVVEGSYLDEMCSVFKLGVMCTATLPTSRPSMKDALQILQSLGEPLFYGEKNFGHYYDAIPLLKSSKETRLHVDSE* 1004
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1443 1003 Pfam Protein kinase domain 692 964 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu4g1443 1003 Gene3D Ribonuclease Inhibitor 145 210 IPR032675 -
Pvu4g1443 1003 SMART LRR_typ_2 503 527 IPR003591 -
Pvu4g1443 1003 SMART LRR_typ_2 95 119 IPR003591 -
Pvu4g1443 1003 SMART LRR_typ_2 192 218 IPR003591 -
Pvu4g1443 1003 SMART LRR_typ_2 551 578 IPR003591 -
Pvu4g1443 1003 SMART LRR_typ_2 242 266 IPR003591 -
Pvu4g1443 1003 SMART LRR_typ_2 313 336 IPR003591 -
Pvu4g1443 1003 Gene3D Phosphorylase Kinase; domain 1 670 767 - -
Pvu4g1443 1003 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 12 997 - -
Pvu4g1443 1003 CDD STKc_IRAK 696 969 - -
Pvu4g1443 1003 SMART serkin_6 690 974 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu4g1443 1003 Gene3D Transferase(Phosphotransferase) domain 1 769 974 - -
Pvu4g1443 1003 Gene3D Ribonuclease Inhibitor 33 144 IPR032675 -
Pvu4g1443 1003 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 12 997 - -
Pvu4g1443 1003 ProSitePatterns Protein kinases ATP-binding region signature. 696 718 IPR017441 GO:0005524
Pvu4g1443 1003 Gene3D Ribonuclease Inhibitor 211 351 IPR032675 -
Pvu4g1443 1003 Pfam Leucine rich repeat N-terminal domain 33 69 IPR013210 -
Pvu4g1443 1003 ProSitePatterns Serine/Threonine protein kinases active-site signature. 818 830 IPR008271 GO:0004672|GO:0006468
Pvu4g1443 1003 SUPERFAMILY RNI-like 290 587 - -
Pvu4g1443 1003 ProSiteProfiles Protein kinase domain profile. 690 974 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu4g1443 1003 SUPERFAMILY L domain-like 42 375 - -
Pvu4g1443 1003 Pfam Leucine rich repeat 74 132 IPR001611 GO:0005515
Pvu4g1443 1003 Pfam Leucine rich repeat 291 350 IPR001611 GO:0005515
Pvu4g1443 1003 SUPERFAMILY Protein kinase-like (PK-like) 679 966 IPR011009 -
Pvu4g1443 1003 Gene3D Ribonuclease Inhibitor 352 618 IPR032675 -
Pvu4g1443 1003 SMART LRR_sd22_2 192 217 - -
Pvu4g1443 1003 SMART LRR_sd22_2 266 292 - -
Pvu4g1443 1003 SMART LRR_sd22_2 95 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1443 Pvu-Chr4 41556561 41560351 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g1443 31 1003 Receptor kinase-like Gene Family AT5G25930 50.966 0.0 940
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pvu4g1443 Pkinase 9.1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1443 - - gmx:100813894 1641.71