Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1439 ATGAGCTTGGCCTTAACCATAAGGCTTTTGTATGTGGTCTTGTTTGTGTCATTCAAATCCAACATGGTGTTGTGCATTGAAATTGAGGAATTCTTCCCAGAAGAAAGAGATGGTTTGATGCTCATAAGGGATTCTTTGAATTCATCTGTGAATTTGCATGGGAATTGGACAGGTCCTCCTTGTATAGAAAATCTGAGTAGATGGATTGGTATCACTTGCTCAAATTGGCATGTTGTTCATATTGTTCTTGAAGGAGTTAACCTCAGTGGCTATTTACCTCCCACATTCCTTCAAAACATAACTCTCTTGAGCCAACTTGACTTCAGAAATAATGCACTTTTTGGACCATTGCCAAGCCTCAAGAATTTGGTGTTTTTGGAACAAGCCCTTTTATCATTCAATCGTTTCTCAGGGTCAATTCCTCTGGAGTATGTTGAACTTACCAGACTACAAGAGTTGGAGCTGCAAGAGAATTACTTACATGGTCAAATTCCACCCTTTGATCAACCATCATTGACCAGTTTCAATGTGTCATATAATTATCTGTCAGGGCCTATTCCTCAAACTTCTGTGCTGCTAAGGTTCCCAGAGAGTTCATATGGCAATAATTCAGATCTCTGTGGAGATCCATTGGATAAGTTATGTCCTATTGAACCTCCTGCCCCATCTCCAGCACCATTTTCTGCTCCACCTCCTTTTGCTATGCCTCCAATCCCAGCAGTGAAGCCAAATAAGAGGTTTCAAGCATGGACTGTTGCTGTGATTGGTGCTGCAGCTGCACTGATTCTTCTTTCTCTGATCACTATTACTGCTTTCTTGTTTCGTAAAAGAAGAGGAAAAGAAGTAAGAAGAAACGATTCAGATGGGCATGTTTTTGGGGATTGGGCAAAGAAGATGGTGGCTTATGGTGGGGGCAGTGATGTTTCTGAAAGATTAGGCAGATTGGAATTTTCTAACAAGAAACTGCCAGTTTTTGACTTGGATGATTTATTAAGGGCATCAGCAGAAATTCTAGGGAGAGGGAACTTGGGTATTACGTACAAAGCAACACTTGAAACTGGAACTGTTGTTGCAGTGAAGAGACTAAACCACATGAATGAACTGAGCAAGAAGGAATTTATCCAGCAGATACAATTGCTAGGACAGATGAAGCATGAAAATATAGTAGAAATAATCTCCTTTTATCATTCAGAGGAGCAAAAGTTGGTCATATATGAATTTACTTCTGATGGCACTTTGTTTGAACTCCTACATGAGGGTAGAGGAGTTGGAAGAATGCCACTTGATTGGACCACAAGACTTTCTATTATCAAAGACATAGCAAAGGGTCTTCTTTTCCTTCATCAATCCTTGCCTTCTCAAAAGGTCCCTCATGCCAACCTCAAGTCATCCAATGTCCTAATCCATCAAGATAGTAAAGGGTACCATTCCAAGCTCACAGACTATGGTTTCTTGCCACTACACTCAGCCAAACAGAATGCTGAAAAACTAGCCATAAGGAGGTCACCAGAATTTGTTCAAGGGAAGAAGCTGACACACAATGCTGATGTCTATTGCTTTGGCATCATTGTGCTAGAGATTGTAACTGGCAAAATCCCTGGCCATATCATAGGTGATATTGAAGAAACAACCAATGATCTCTCAGATTGGGTAAGAACTGTGGTGAACAATGATTGGTCCACAGATATATTGGACTTAGAAATACTTGCAGAAAAAGAAGGGCATGATGCAATGCTAAAGCTAACAGAGTTAGCTCTAGAGTGTACAGATATGACACCAGAGGAGAGGCCTAAAATGAGTGTAGTATTGAAGAGGATAGAAGAGATAGAGCAAATGCCAAAGGAGAATGACTAA 1854 0.4051 MSLALTIRLLYVVLFVSFKSNMVLCIEIEEFFPEERDGLMLIRDSLNSSVNLHGNWTGPPCIENLSRWIGITCSNWHVVHIVLEGVNLSGYLPPTFLQNITLLSQLDFRNNALFGPLPSLKNLVFLEQALLSFNRFSGSIPLEYVELTRLQELELQENYLHGQIPPFDQPSLTSFNVSYNYLSGPIPQTSVLLRFPESSYGNNSDLCGDPLDKLCPIEPPAPSPAPFSAPPPFAMPPIPAVKPNKRFQAWTVAVIGAAAALILLSLITITAFLFRKRRGKEVRRNDSDGHVFGDWAKKMVAYGGGSDVSERLGRLEFSNKKLPVFDLDDLLRASAEILGRGNLGITYKATLETGTVVAVKRLNHMNELSKKEFIQQIQLLGQMKHENIVEIISFYHSEEQKLVIYEFTSDGTLFELLHEGRGVGRMPLDWTTRLSIIKDIAKGLLFLHQSLPSQKVPHANLKSSNVLIHQDSKGYHSKLTDYGFLPLHSAKQNAEKLAIRRSPEFVQGKKLTHNADVYCFGIIVLEIVTGKIPGHIIGDIEETTNDLSDWVRTVVNNDWSTDILDLEILAEKEGHDAMLKLTELALECTDMTPEERPKMSVVLKRIEEIEQMPKEND* 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1439 617 SUPERFAMILY L domain-like 35 195 - -
Pvu4g1439 617 PANTHER POLLEN RECEPTOR-LIKE KINASE 4 11 611 - -
Pvu4g1439 617 ProSiteProfiles Protein kinase domain profile. 332 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu4g1439 617 Pfam Protein kinase domain 335 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu4g1439 617 Gene3D Phosphorylase Kinase; domain 1 306 407 - -
Pvu4g1439 617 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 11 611 - -
Pvu4g1439 617 Gene3D Ribonuclease Inhibitor 33 217 IPR032675 -
Pvu4g1439 617 Pfam Leucine rich repeat N-terminal domain 34 74 IPR013210 -
Pvu4g1439 617 Gene3D Transferase(Phosphotransferase) domain 1 409 617 - -
Pvu4g1439 617 SUPERFAMILY Protein kinase-like (PK-like) 336 607 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1439 Pvu-Chr4 41516687 41518981 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g1439 55 610 Receptor kinase-like Gene Family AT1G68400 34.000 2.44e-103 326
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pvu4g1439 Pkinase 9.4e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1439 - - gmx:102668068 1004.2