Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1438 ATGGCAACCCGAAGATATTCTTTTGGAAGGGCTGATGAGGCCACTCATCCAGACTCCATGAGGGCCTCTTTGGCTGAATTTGCTTCTACTTTCATCTTTGTCTTTGCTGGAGAAGGCTCTGGCCTTGCTTTGGTTAAGATTTACCAGGATTCAGCTTTCTCAGCTGGTGAACTGTTAGCACTTGCACTTGCCCATGCATTTGCTCTATTTGCTGCTGTTTCTGCTAGCATGCATGTATCAGGTGGTCATGTCAACCCAGCTGTGACATTCGGTGCTCTCATTGGGGGGAGGATCTCTGTGATCCGTGCAGTATACTACTGGATTGCTCAACTTCTGGGTTCTATAGTGGCTGCCCTTGTGCTCAGGCTTGTCACTAATAACATGAGGCCATCAGGGTTCCACGTGTCACCAGGTGTTGGAGTTGGACACATGTTTATACTTGAGGTTGTGATGACATTTGGGCTGATGTATACTGTATATGGTACTGCAATAGATCCGAAAAGGGGTGCTGTTAGCAATATTGCACCCTTGGCAATTGGGCTCATTGTTGGTGCAAACATCCTTGTTGGTGGGCCATTTGATGGAGCATGCATGAACCCTGCTCTTGCTTTTGGACCTTCCTTGGTGGGCTGGCAATGGCACCAGCACTGGATCTTCTGGGTGGGTCCACTACTTGGGGCTGCACTGGCAGCACTGGTGTATGAATATGCTGTGATCCCAATTGAACCACCCCCACACCACCACCAACCTTTGGCAACTGAAGATTACTAG 771 0.489 MATRRYSFGRADEATHPDSMRASLAEFASTFIFVFAGEGSGLALVKIYQDSAFSAGELLALALAHAFALFAAVSASMHVSGGHVNPAVTFGALIGGRISVIRAVYYWIAQLLGSIVAALVLRLVTNNMRPSGFHVSPGVGVGHMFILEVVMTFGLMYTVYGTAIDPKRGAVSNIAPLAIGLIVGANILVGGPFDGACMNPALAFGPSLVGWQWHQHWIFWVGPLLGAALAALVYEYAVIPIEPPPHHHQPLATEDY* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1438 256 SUPERFAMILY Aquaporin-like 13 249 IPR023271 -
Pvu4g1438 256 Gene3D Glycerol uptake facilitator protein. 5 242 IPR023271 -
Pvu4g1438 256 PANTHER MAJOR INTRINSIC PROTEIN (MIP) FAMILY TRANSPORTER 1 256 - -
Pvu4g1438 256 Pfam Major intrinsic protein 14 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu4g1438 256 CDD MIP 21 236 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu4g1438 256 TIGRFAM MIP: MIP family channel proteins 25 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu4g1438 256 ProSitePatterns MIP family signature. 83 91 IPR022357 -
Pvu4g1438 256 PANTHER AQUAPORIN-8 1 256 IPR034294 -
Pvu4g1438 256 PRINTS Major intrinsic protein family signature 21 40 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu4g1438 256 PRINTS Major intrinsic protein family signature 65 89 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu4g1438 256 PRINTS Major intrinsic protein family signature 102 121 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu4g1438 256 PRINTS Major intrinsic protein family signature 147 165 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu4g1438 256 PRINTS Major intrinsic protein family signature 180 202 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu4g1438 256 PRINTS Major intrinsic protein family signature 217 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1438 Pvu-Chr4 41509587 41511316 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g1438 2 256 Major Intrinsic Protein MIP AT1G73190 69.318 6.89e-121 343
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1438 K09873 - gmx:100817450 443.736