Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1432 ATGAGAAACTCTGAGGCAACAAGCCATGTGGGTATGGAGATAGAAGCAACAGCTAGGCCTTCAGGGAATGGTTCCACCCTACCAGGGTTGAGTCCTCTCAGTGAGACCCTTTGGAGAGAGAAGGCCAACTCAGAGATCATTGGAGATGTCTCAGCAAGACTCACATGGAAGGATCTGACTGTGATGGTCACTCTCAGCAACGGTGAGACACAAAACGTTTTGGAGGGTCTCACTGGTTATGCTGAACCAGGAACCTTCACTGCTCTCATGGGACCCTCAGGTTCTGGAAAATCTACTCTCCTTGATGCTCTTTCTAGTCGCCTAGCTGCAAATGCCTTTCTCTCAGGCACCATCCTTCTCAATGGACGCAAAGCCAAACTCTCTTTTGGCACCGCAGCTTATGTGACACAAGATGACAACTTGATTGGCACCTTAACAGTGAGAGAAACTATATCATATTCAGCTCGTTTGCGTTTGCCTGATAACATGCCATGGACAGATAAGAGAGCACTGGTGGAGAGCACCATTGTGGCAATGGGACTGCAAGATTGTGCAGACACAGTGATTGGAAATTGGCACTTGCGTGGTATCAGTGGTGGGGAGAAGAGAAGGGTTAGCATTGCCTTGGAGATCTTGATGAGACCAAGGTTGCTTTTCCTTGATGAGCCAACTAGTGGACTTGACAGTGCTTCAGCATTCTTTGTGACTCAGACACTACGTGCCTTGGCAAGGGATGGGAGAACCGTGATAGCCTCTATTCATCAACCTAGCAGTGAAGTGTTTGAGTTATTTGACCAATTGTACTTGCTTTCTAGTGGCAAAACTGTTTATTTTGGGCAGGCTTCAGACGCATATGAGTTCTTTGCACAAGCTGGCTTCCCTTGTCCTGCTTTGAGGAACCCTTCTGATCATTTCCTCAGGTGCATCAATTCTGACTTTGACAAAGTCAAGGCCACTCTTAAAGGGTCCATGAAATTGAGGTTTGAGGGAAGTGATGATCCTTTGGACAGGATCACTACTGCTGAAGCAATCAGAACTCTTATTGACTTCTACCGCTCTTCTCAGCACTCTTATGCTGCAACTCAAAAAGTGGATGAGATATCTAAAGTTAAGGGAACAGTGCTTGAAGCTGGAGGAAGTGAGGCTAGTTTCTTGATGCAGTCTTACACTTTAACCAAACGTTCCTTCATGAACATGTCAAGGGACTTTGGCTACTACTGGCTTAGGCTTGTTATCTACATCGTGGTCACTATCTGTATTGGAACCATTTATTTGAATGTGGGGACAGGCTACAACTCTATTCTGGCCAGAGGTTCTTGTGCATCTTTTGTCTTTGGTTTTGTGACCTTCATGTCAATTGGTGGATTCCCTTCATTTGTTGAAGACATGAAGGTTTTCCAAAGGGAGAGGCTTAATGGCCACTATGGTGTCACTGCATTTGTCATCAGCAACACATTATCTGCAATGCCCTTCCTGATTTTGATCACATTTCTCTCTGGAACCATTTGCTACTTCATGGTTCGCCTGCACCCTGGTTTTTGGCATTATGTTTTCTTTGTGTTGTGCCTTTATGCCAGTGTCACAGTGGTTGAAAGCTTAATGATGGCAATTGCTAGCATTGTCCCCAACTTCCTCATGGGCATCATTATTGGAGCAGGAATTCAGGGCATATTCATGTTGGTCTCAGGCTACTTTAGGCTTCCACATGATATCCCAAAGCCAGTGTGGCGCTACCCTATGTCATACATCAGTTTCCACTTCTGGGCACTACAGGGTCAGTACCAGAATGATTTGAGGGGCTTGATATTTGACAACCAGACACCAGAGCTTCCAAAGATACCAGGAGAATACATCTTGGAAAAAGTGTTTCAAATTGATGTGAACAGATCAAAGTGGATAAACCTGAGTGTGATCTTCAGCATGATTGTGATCTACCGCATCATTTTCTTCATCATGATCAAAATCAACGAGGATGTGACACCATGGGTTAGAGGGTACTTGGCTAGGAGGAGAATGCAGCAGAAGAGCGGAGCACAGAATACAACTATTGCACCTGATGTTCTCACTCAGTCACCATCTCTCAGAACCTATGTTTCCCCTCCAACAAAATGA 2112 0.4517 MRNSEATSHVGMEIEATARPSGNGSTLPGLSPLSETLWREKANSEIIGDVSARLTWKDLTVMVTLSNGETQNVLEGLTGYAEPGTFTALMGPSGSGKSTLLDALSSRLAANAFLSGTILLNGRKAKLSFGTAAYVTQDDNLIGTLTVRETISYSARLRLPDNMPWTDKRALVESTIVAMGLQDCADTVIGNWHLRGISGGEKRRVSIALEILMRPRLLFLDEPTSGLDSASAFFVTQTLRALARDGRTVIASIHQPSSEVFELFDQLYLLSSGKTVYFGQASDAYEFFAQAGFPCPALRNPSDHFLRCINSDFDKVKATLKGSMKLRFEGSDDPLDRITTAEAIRTLIDFYRSSQHSYAATQKVDEISKVKGTVLEAGGSEASFLMQSYTLTKRSFMNMSRDFGYYWLRLVIYIVVTICIGTIYLNVGTGYNSILARGSCASFVFGFVTFMSIGGFPSFVEDMKVFQRERLNGHYGVTAFVISNTLSAMPFLILITFLSGTICYFMVRLHPGFWHYVFFVLCLYASVTVVESLMMAIASIVPNFLMGIIIGAGIQGIFMLVSGYFRLPHDIPKPVWRYPMSYISFHFWALQGQYQNDLRGLIFDNQTPELPKIPGEYILEKVFQIDVNRSKWINLSVIFSMIVIYRIIFFIMIKINEDVTPWVRGYLARRRMQQKSGAQNTTIAPDVLTQSPSLRTYVSPPTK* 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1432 703 CDD ABCG_EPDR 51 279 - -
Pvu4g1432 703 MobiDBLite consensus disorder prediction 1 30 - -
Pvu4g1432 703 Gene3D - 48 292 IPR027417 -
Pvu4g1432 703 SMART AAA_5 83 254 IPR003593 -
Pvu4g1432 703 Pfam ABC-2 type transporter 254 310 IPR043926 GO:0140359
Pvu4g1432 703 ProSitePatterns ABC transporters family signature. 197 211 IPR017871 GO:0005524
Pvu4g1432 703 Pfam ABC-2 type transporter 387 593 IPR013525 GO:0016020|GO:0140359
Pvu4g1432 703 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 10 701 - -
Pvu4g1432 703 Pfam ABC transporter 76 225 IPR003439 GO:0005524
Pvu4g1432 703 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 54 290 IPR027417 -
Pvu4g1432 703 PANTHER OS04G0528300 PROTEIN 10 701 - -
Pvu4g1432 703 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 54 297 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1432 Pvu-Chr4 41411277 41417248 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g1432 84 258 Calmodulin-binding Proteins AT2G36910 33.871 1.61e-11 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1432 K05681 - gmx:100816389 1331.24