Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1419 ATGGCTCAAAAACAAGCACCTTCTTCTTCTTCTTTTATATCAAAATACAGTTATGATGTTTTTCTTAGTTTTCGTGGTGAAGATACCCGTTTTGGTTTCACTGGTAATCTGTACAGTGCTTTGAGTCAAAGGGGAATCTTTACCTTCATCGATGATGAAGCTCTCAGAAAAGGAGAAGAGATCACACCTTCTCTTCGCAGGGCAATCCAAGAATCCAGGATATCCATCATTGTTTTCTCCAAAAACTATGCTTCCTCAAGATTTTGTTTGGATGAACTTCTCCAAATCATTGAGTGTCACACGAAACAGAACATGTGGATTTTGCCAGTGTTTTATGGCGTAGATCCATCACACGTGCGACATCAAAGAGGGAGTTTCCGAGAAGCATTTGCAAAGCATGAAGGTGAAAGATTCAAAGATGACAATGAGAAGGTTCAACAATGGAGGTTGGCTTTGCGTCATGCTGCTGATTTGTCTGGTTTGCATTTCAAAACTGGTGAAGAGTATGAGTCTGAGATGATGAGAAAGATCACAGAAGTGATCTCGACTAAGCTTAATCGACCTCCCTTGCATATTGCTGATTATCCTGTTGGTTTGAAAGTTCAGATGCAACAGATAGAAAAACTCATGGGTAGTGGTGAGTTTGATAACAAAGTGACCATGCTTGGGATTCATGGCATGGGTGGAATAGGAAAATCAACTCTTTCAAGAGCGATACACAACTTGATAGCACATCAATTTGAATCTTCACACTTTCTTGCTAATGTCAGGGAAAAGTCAAGTAAGGATGGCCTGGTGCATATCCAAGAGACAATGCTATCTGAGTTGGTGGGAGAGAAAAGTATGAAGTTGGGAGATGTTCATCGAGGAATTCCAATACTACAACAAAGACTAAGTCGGAAAAAGGTCCTTCTTGTGCTTGATGATATTAGCAAAAAGGAACAATTGCTTGCAACTGCTGGAGGACTTGATTGGTTTGGCCCTGGTAGCATCATCATTATAACAACAAGGGATAAACATTTGTTAGATGTTCATGGAGTTGAAAAACAGTACAAGGTTGAAGAAATAAACGATATTGAAGCCCTTGAATTGTTGAAGTGGAATGCTTTCAAGAACAAAGAAGTTTATCCATGTTACAAGGAAGTCACAAAGCGTGCAATGTATTATGCCAACGGCCTTCCACTTGCTTTGGAAACAATTGGCTCAAACTTGTTTGGTAAAACCTTGGATGAATGGGAATCTGCGTTAGAAGCTTATGAAAGAATTCCAAATAGAGATGTTCAGGAAGTTCTTAGAGTTAGCTATGATAGTTTGGATGCTTTTGAGAAAGAAATATTTCTTGACATGGCTTGCTTCTTCACAGGATTTTCTCTTGAATACGTTACAAATATGCTTGAGGCAAGAGGTTTTCCTTCAAAATTTGGTATTAGAGTGCTGGAACAAAAATCTCTCATTAAAATTCGTGGATGTCGACATGAAACTGTGACAATGCACGACATGATTCAGTCTATGGGAAAGGAAATAGTTAGACAACAATCAACTCTTCCCCACAAAAGGAACAGGTTGTGGCTTTACGAGGACATTGTTTGCGTATTGGAGAAAAACATGGAAAATGATAAAGTTGAAGTGATGATGTTGGACATGCCAGAATACCAAGAAATGCAATGCAATCAAAAGTTGTTTGGAAAAATGAAAAACCTACGGATGATTCTTATAAAAGAGGAAGTTGGCTTTCTTAGAAGCCCTACTGCTCTGCCAAACACTTTGAGAGTACTGGAATGGTGGGGATATCCTGCAACTTCTTTACCGTCCAATTTTCATTTGAAGAATCTTGTCATACTCAACTTGTCACACAGTTACTTTGGATGGGACAAACCACTAGAGAATTCAAAGGTTTTGAGACAATTGATTCTGAAAGGTTGTAAGAATATTAGACGAATACCTGACATGTCTGGTTTCCCTAACTTGACAGAACTTAGGGTTGCTGAATGCACAAATCTGATTGAGATTCATGAATCAGTTGGATCTTTACTTAATCTTCAAAAGTTTTGTGCTGAAGGATGTACCAAGCTCACGATTGGTCCAAGTCGCATAAATTTAATATCTTTGGAGCATCTGTGCCTCCGGGACTGCAGCAGTCTAGTTATGTTTCCTGAAGTATCGGCACCAATGCAAAAACTAAAATACGTTGACTTGGTAGGAACTGCCATAAAAAATCTGCCACTTTCAATGCAAAATCTCGAGGGTCTTCAAATGTTGTCCCTGGGGAAATGCAATTTGCTTGAAATTAATGAATCACCCTATTTCTTTCAAAAGCTGCATATGTTGTTTCCTAATTTGACAGGATTGTATCTACGAGACTTAGACATTACAATTCTTCCTGCCTGCATTGAAGAATGTCACACCTTGAAATTTCTGTACGTGACCAACTGCAAGAAGCTTCAAGAAATTAGAGGACTTCCATTGAGCATAAATGAGTTCACAGCAGTAAACTCTCCTGTTAAAGCCAATTCTTTGTTGACATTAAAACTCAGACAGGCCATTCATTCTGCTGCAATAAGAATCTTTGTTCTTCCAGGTTGGGAAATCCCAAAATTGTTTGACCACTCTAGCAGGGGAAACTCTCTAAGTTTTTGGTTTCGTAAAGAATTGCCCTCTCTCGCTGTGTGTGCTATTATTGGAGTCTGGGATAATGTGAAGCCTCCTTTTGCTGCCAGCTTTAATTTCTATGTTAAACTAAATGATATTTATATGTGTGTTTCTTGTTTCCGTTGTGGTAATATAAGCTGGACACCTGAGGATAGTCACATAATTATACTCAACCGTCAAAATGATTTTCAACATCCATTGCACTCGGATATTCAGAGAGCGCTTCTGACGAATGAGTGGATTCCTGGGAAAATATTATTGAGGATAGAATCAGAAAAAGATCCAAGTAGATTGGGAAAAATAAAAAAGACCGGAGTTTATGTAAATCGAACATTTAGTAGAGTGGAGGATGTTCGGTTCGAAGATCCTTATGCTCCCAATAAAGCAAGTACTATGGAAAATAAACTTGTGTTGCTAGGTGAGGCACCTGATTTACAACAACAGCAGCAACGATCCCCATCTTTATTCAACCCCACAACCCCATTAGAATCTGCTGTTGGGGAACAACATTCATACACTGTTGACTCCAATAACCAAGATGGAGAGTTTCTGGATGATCAACCAATTTTGGCTCCAAGTGTTGCGGAGATGCAAAATGGCAAGGCCCAAAAGGAAATGTCAGCACTGATATCAGAAGTTTCAAGTGAGTTCACTGCTCAGAGTAGGGAAATTGAGTCCACAGAATCCCAGTCACGTAAAGTTGATGAAGCAGAAGCAGGTTTGGAAACTCAGAACCAGTTCAGAAGTACTATGGTCTTGCAAAATCAAATAGACCAAAGGCTAACTAGGATTAGGAAAATGAAAGAAGATTTAGGAGAGAAACTGAGTGGTATTAAAGCCGACATCTCTGCCATTGAAGCTAACCACTCTTCCATTAAAGCTAACATATCTGCCATTAAAGCTATAATCTCTGCAGACTCAGAGCTACAGCAATTAAAATAG 3591 0.391 MAQKQAPSSSSFISKYSYDVFLSFRGEDTRFGFTGNLYSALSQRGIFTFIDDEALRKGEEITPSLRRAIQESRISIIVFSKNYASSRFCLDELLQIIECHTKQNMWILPVFYGVDPSHVRHQRGSFREAFAKHEGERFKDDNEKVQQWRLALRHAADLSGLHFKTGEEYESEMMRKITEVISTKLNRPPLHIADYPVGLKVQMQQIEKLMGSGEFDNKVTMLGIHGMGGIGKSTLSRAIHNLIAHQFESSHFLANVREKSSKDGLVHIQETMLSELVGEKSMKLGDVHRGIPILQQRLSRKKVLLVLDDISKKEQLLATAGGLDWFGPGSIIIITTRDKHLLDVHGVEKQYKVEEINDIEALELLKWNAFKNKEVYPCYKEVTKRAMYYANGLPLALETIGSNLFGKTLDEWESALEAYERIPNRDVQEVLRVSYDSLDAFEKEIFLDMACFFTGFSLEYVTNMLEARGFPSKFGIRVLEQKSLIKIRGCRHETVTMHDMIQSMGKEIVRQQSTLPHKRNRLWLYEDIVCVLEKNMENDKVEVMMLDMPEYQEMQCNQKLFGKMKNLRMILIKEEVGFLRSPTALPNTLRVLEWWGYPATSLPSNFHLKNLVILNLSHSYFGWDKPLENSKVLRQLILKGCKNIRRIPDMSGFPNLTELRVAECTNLIEIHESVGSLLNLQKFCAEGCTKLTIGPSRINLISLEHLCLRDCSSLVMFPEVSAPMQKLKYVDLVGTAIKNLPLSMQNLEGLQMLSLGKCNLLEINESPYFFQKLHMLFPNLTGLYLRDLDITILPACIEECHTLKFLYVTNCKKLQEIRGLPLSINEFTAVNSPVKANSLLTLKLRQAIHSAAIRIFVLPGWEIPKLFDHSSRGNSLSFWFRKELPSLAVCAIIGVWDNVKPPFAASFNFYVKLNDIYMCVSCFRCGNISWTPEDSHIIILNRQNDFQHPLHSDIQRALLTNEWIPGKILLRIESEKDPSRLGKIKKTGVYVNRTFSRVEDVRFEDPYAPNKASTMENKLVLLGEAPDLQQQQQRSPSLFNPTTPLESAVGEQHSYTVDSNNQDGEFLDDQPILAPSVAEMQNGKAQKEMSALISEVSSEFTAQSREIESTESQSRKVDEAEAGLETQNQFRSTMVLQNQIDQRLTRIRKMKEDLGEKLSGIKADISAIEANHSSIKANISAIKAIISADSELQQLK* 1197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1419 1196 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 182 448 IPR027417 -
Pvu4g1419 1196 Gene3D - 187 353 IPR027417 -
Pvu4g1419 1196 SMART till_3 17 158 IPR000157 GO:0007165
Pvu4g1419 1196 Gene3D Ribonuclease Inhibitor 552 696 IPR032675 -
Pvu4g1419 1196 Gene3D Ribonuclease Inhibitor 697 845 IPR032675 -
Pvu4g1419 1196 ProSiteProfiles TIR domain profile. 16 185 IPR000157 GO:0007165
Pvu4g1419 1196 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 16 719 - -
Pvu4g1419 1196 SUPERFAMILY L domain-like 497 845 - -
Pvu4g1419 1196 Gene3D - 15 186 IPR035897 -
Pvu4g1419 1196 SUPERFAMILY Toll/Interleukin receptor TIR domain 8 160 IPR035897 -
Pvu4g1419 1196 Pfam NB-ARC domain 206 438 IPR002182 GO:0043531
Pvu4g1419 1196 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 16 719 IPR044974 GO:0006952
Pvu4g1419 1196 Gene3D - 356 439 IPR042197 -
Pvu4g1419 1196 PRINTS Disease resistance protein signature 221 236 - -
Pvu4g1419 1196 PRINTS Disease resistance protein signature 297 311 - -
Pvu4g1419 1196 PRINTS Disease resistance protein signature 390 404 - -
Pvu4g1419 1196 PRINTS Disease resistance protein signature 745 761 - -
Pvu4g1419 1196 Pfam TIR domain 18 187 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1419 Pvu-Chr4 41230617 41234797 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g1419 12 837 WRKY Transcription Factor Family AT4G12020 28.588 1.66e-71 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1419 - - vun:114182325 1918.66