Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1396 ATGAAAGGATGGTGCCAGCTTTTCCCAACTATACAAAGCTTCATTTTCTTTTTCTCTCCTTGCTGGTCCACATTACAACTAAGTTCAATCCTCTCACCAAGTATTGTGTGTGTATATATACCTTGTTGTTTCATCAAGATTCTGAACAAACCCCTTTTGAATTCTTTGAAGACTGTGATCATGGCTAATTTTCTGACACTGCTTTTTGCTGTGGAAATGATAGTGGTGAGTGGTTTCAGTTTGGGAGCAAGTGGCTTGAACATGAACTACTACTTGTTCAGTTGCCCTTTGGCTGAACTTATTGTTAAGAGCACACTCAACAGAGCTCTGCAAGATGATCCCACCCTAGCAGCAGGGCTTGTTAGAATGCACTTCCATGACTGTTTCATAGAGGGATGTGATGGCTCAGTTCTGATCGACTCCACTAAGGACAACACAGCAGAAAAAGATTCACCAGCAAATTTGAGCTTGAGGGGCTATGAAGTAATAGATGATATCAAGGAAGAGCTTGAAAAACAATGCCCAGGAGTGGTTTCATGTGCTGACATTCTTGCTATGGCTGCTAGAGATGCAGTTTTCTTCGCAGGGGGTCCTGTGTATGACATACCAAAAGGTAGGAAGGATGGAACAAGGTCCAAAATTGAGGATACTTTCAATCTTCCTGCACCCATTTTCAATGCTTCTCAGCTCATTAAGATGTTTGGGCAACGTGGGTTTTCTGCAAAAGACATGGTGGCTCTCTCAGGAGCTCACACATTAGGAGTGGCAAGGTGTTCTTCATTCAAGCAGAGACTTACCCCATTGGATCCATCTTTGGACTCACAGTTTGCAAAGACACTCTCCAAGACATGCAGTGGTGGTGACACTGCAGAGCAGCCCTTTGACTCCACCAGGAACGATTTCGACAACCTATACTTCAACGCTCTGGTCTCAAACAACGGTGTTCTCACATCAGACCAAACGTTGTACACCACCCCACAAACCAGAAACCTTGTAAACTCTTATGCAATGAACCAAGCCTTGTTCTTCTTGGATTTTCTACAGGCAATGGTGAAGATGAGCACGCTCGATGTGAAAGAAGGGTCCAGAGGGGAAGTACGAAGAAATTGCCATAAAATAAACTGA 1125 0.4373 MKGWCQLFPTIQSFIFFFSPCWSTLQLSSILSPSIVCVYIPCCFIKILNKPLLNSLKTVIMANFLTLLFAVEMIVVSGFSLGASGLNMNYYLFSCPLAELIVKSTLNRALQDDPTLAAGLVRMHFHDCFIEGCDGSVLIDSTKDNTAEKDSPANLSLRGYEVIDDIKEELEKQCPGVVSCADILAMAARDAVFFAGGPVYDIPKGRKDGTRSKIEDTFNLPAPIFNASQLIKMFGQRGFSAKDMVALSGAHTLGVARCSSFKQRLTPLDPSLDSQFAKTLSKTCSGGDTAEQPFDSTRNDFDNLYFNALVSNNGVLTSDQTLYTTPQTRNLVNSYAMNQALFFLDFLQAMVKMSTLDVKEGSRGEVRRNCHKIN* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1396 374 Gene3D Peroxidase, domain 2 221 353 - -
Pvu4g1396 374 PRINTS Haem peroxidase superfamily signature 117 131 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu4g1396 374 PRINTS Haem peroxidase superfamily signature 178 195 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu4g1396 374 PRINTS Haem peroxidase superfamily signature 196 208 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu4g1396 374 PRINTS Haem peroxidase superfamily signature 243 258 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu4g1396 374 PRINTS Haem peroxidase superfamily signature 294 309 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu4g1396 374 ProSiteProfiles Plant heme peroxidase family profile. 85 374 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu4g1396 374 Gene3D - 89 374 - -
Pvu4g1396 374 SUPERFAMILY Heme-dependent peroxidases 85 374 IPR010255 GO:0004601|GO:0006979|GO:0020037
Pvu4g1396 374 PRINTS Plant peroxidase signature 95 114 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu4g1396 374 PRINTS Plant peroxidase signature 119 139 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu4g1396 374 PRINTS Plant peroxidase signature 158 171 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu4g1396 374 PRINTS Plant peroxidase signature 177 187 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu4g1396 374 PRINTS Plant peroxidase signature 196 211 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu4g1396 374 PRINTS Plant peroxidase signature 242 254 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu4g1396 374 PRINTS Plant peroxidase signature 292 307 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu4g1396 374 PRINTS Plant peroxidase signature 308 325 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu4g1396 374 PRINTS Plant peroxidase signature 348 361 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu4g1396 374 Pfam Peroxidase 102 337 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu4g1396 374 ProSitePatterns Peroxidases active site signature. 117 128 IPR019794 GO:0004601
Pvu4g1396 374 PANTHER PEROXIDASE 47 79 372 - -
Pvu4g1396 374 CDD secretory_peroxidase 85 373 IPR033905 GO:0004601|GO:0042744
Pvu4g1396 374 PANTHER PEROXIDASE 25-RELATED 79 372 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu4g1396 374 ProSitePatterns Peroxidases proximal heme-ligand signature. 243 253 IPR019793 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1396 Pvu-Chr4 40921908 40924831 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g1396 59 374 Peroxidase AT4G33420 72.785 3.06e-170 478
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1396 K00430 - gmx:100809245 577.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g1396 4 40921908 40924831 Pvu7g1169 7 15468185 15470458 PCT