Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1366 ATGGAGTGCAATAAGGATGAGGCTACCAGGGCAAAAGAAATTGCTGAGAGGAAGTTTGCTGCAAAGGATATATCAGGAGCAAAGAAATTTGCTTTGAAGGCCCTAAATCTATTTCCTGAACTTGAGGGTATTTCTCAGATGGTAGCAACACTTGATGTGTATATTTCGGCTGAGAATAAAACAAATGGAGAAGCAGATTGGTACGGTGTACTTGGTGTGGACTCCCTTGCTGATGATGATACAGTAAGGAGACAATACAGGAAGCTAGCTCTCATGCTTCACCCTGATAAGAACAAGTCCATTGGAGCTGATGGGGCCTTTAAACTTGTTTCTGAGGCATGGAGTTTACTATCAGATAAGACTAAAAGAGCAGCATATGATAAGAGAAGTGGAAAAGAACGGAAAGTCTCTTCCAAGTTTGGAGGTTCATCAGCACAAAAAGGCACTAATGGTAGTTACAATTTTACAAAGACTACCCCTTCAAGCGCAGCTGTTCAGAAGAGTACTGCTAAAGAGCACACTTCATCTTCTACTCATAAGTCAAAATCAAATACATTTTGGACTGTTTGCACTCGGTGCAAAATGCAGTACGAGTATCTTAGAGTTTATCTTAACCTCAAACTCTTATGCCCCAACTGCCGTACAGCATTTGTGGCTGTAGAGACTTCTCCTCCACCTGCAAGTGGTATTAGACCTGCAACTCAATGGAATTTTGCACAGAAGAAGCAAAATTCCAATCGCCAAGTACCTAATAAAAGCAAATCGAATGCCGGAAGGAATGACATGGCTGCTCCAAATGTTGGAGCAGGATCTTATAGTAATACTGAAACAGGCAGTTTCCAGTGGGCTCCATTCTCAAAATCATCCGGTGTTTCCAACGTGGCTCAAGCTGCAAGTGTGGTTCAGCAGGCATATGATAAAGTGAAGCGAGATCGGGAGGAGGCACAAGCAGCTAGCAAAAGGGAAGAAGCCTTAAAAAGGAAGCAGCATGTTTCTAAAAAGGGTTACTATAATCCTGCTAAGAGAAGAAGAGGGGGCATGGAGGACCCAAGTGCAAGTGGTGGTAAGGAAAATCGGGGTGGATCTAAACCGGCTAATTTTGAATATAATAGGGTTAATGGAATCAACAAGACTGACAGTATGGGGGAAATCTCCCCAGTTGAGCTTCGGAATCTTCTTATGGAGAAAGCTAGAAAAGAAATTAGCAATAAACTCCTGGGAAATCAGTCAAATGCTGTTGATAAAACAGTGATGAAAGAGAGTGGAGATAACTTCTATAAAGTGAACGATAAAGGAGAGAAATGCTTAAGAAATTCTGAAACGTCTGCTCAAGATAACATTGCCATCATGTCGTTAGCAGGCTCTACAATTGCTAAAGGTAACAGAAAATTTCTAGAAACAACAGCTATTGATGTACCAGACCCTGACTTCCATGATTTTTTCAAAGATCGAACTGAAGTATCTTTCACTGAAAATCAAGTATGGGCTGTATATGATAACGATGATGGGATGCCTCGATGTTATGCTATGATTCATGGCATCATCTCCATGAATCCATTCAAGATAAAGATCAGTTGGCTCAACCCAAATACCAATAGTAAACTGGACCCCATTAAATGGGTTGCTTCAGGCTTTTCAAAAATTTGTGGGGATTTCAGATTGAGCAGACCTGAAATCTGTAGCTCGACCAACTTTTTCTCCCACAAGGTTAGGTGGAGAACAGGTGCTGATGGAGCTATTTGTATATATCCCAGGAAAGGGGATGTTTGGGCCTTATACAGGAATTGGTCTCCTGACTGGGATGAGGTAACACCAGATGAGGTTATTCACAAGTTTGATGTGGTTGAAGTACTTGAGGATTTTATCGAAGGGCATGGTATAGATGTTATTCCTCTGGTCAAAGTGGCTGGATTCAGGACAGTATTTCACCACCACTTAGATCCAACAGAAATCAGGATCATTCCGATGGAAGAGATGTTTCGATTCTCTCATCAAATACCTTCATATGTACTCACTGGTCAAGAAGCTCCAGATGCTCCAAAGGGTTGCAGGGTGTTGGACCCAGCTGCTACTCCATTTGAATTTCTTCAGCTAATAGAAGTTGTGAAGGTGGAAGACATGGCAGACAAAGAGGATACTGATGTCAAAGAACCAAGCGATAAAATGATAAAAGAAAGTAATAAGGAAATGATCAACTATATGGGAAAAGTTGAGGAAGAAAAGAAGGGGGAGGATGAAGACATGCAGGAAGTAGATACAAGTGACGACATGACAAAAGCTAATAATGAGGAAATGATCAATGATGTGCGGAAACTCGGGGAAGTACAGCAGGAAAAGGACAAAGACATGCGCAGTAAGGAAAAACTTTGA 2370 0.4148 MECNKDEATRAKEIAERKFAAKDISGAKKFALKALNLFPELEGISQMVATLDVYISAENKTNGEADWYGVLGVDSLADDDTVRRQYRKLALMLHPDKNKSIGADGAFKLVSEAWSLLSDKTKRAAYDKRSGKERKVSSKFGGSSAQKGTNGSYNFTKTTPSSAAVQKSTAKEHTSSSTHKSKSNTFWTVCTRCKMQYEYLRVYLNLKLLCPNCRTAFVAVETSPPPASGIRPATQWNFAQKKQNSNRQVPNKSKSNAGRNDMAAPNVGAGSYSNTETGSFQWAPFSKSSGVSNVAQAASVVQQAYDKVKRDREEAQAASKREEALKRKQHVSKKGYYNPAKRRRGGMEDPSASGGKENRGGSKPANFEYNRVNGINKTDSMGEISPVELRNLLMEKARKEISNKLLGNQSNAVDKTVMKESGDNFYKVNDKGEKCLRNSETSAQDNIAIMSLAGSTIAKGNRKFLETTAIDVPDPDFHDFFKDRTEVSFTENQVWAVYDNDDGMPRCYAMIHGIISMNPFKIKISWLNPNTNSKLDPIKWVASGFSKICGDFRLSRPEICSSTNFFSHKVRWRTGADGAICIYPRKGDVWALYRNWSPDWDEVTPDEVIHKFDVVEVLEDFIEGHGIDVIPLVKVAGFRTVFHHHLDPTEIRIIPMEEMFRFSHQIPSYVLTGQEAPDAPKGCRVLDPAATPFEFLQLIEVVKVEDMADKEDTDVKEPSDKMIKESNKEMINYMGKVEEEKKGEDEDMQEVDTSDDMTKANNEEMINDVRKLGEVQQEKDKDMRSKEKL* 790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1366 789 PANTHER BNAC03G44070D PROTEIN 1 697 - -
Pvu4g1366 789 SUPERFAMILY Chaperone J-domain 60 126 IPR036869 -
Pvu4g1366 789 MobiDBLite consensus disorder prediction 240 260 - -
Pvu4g1366 789 MobiDBLite consensus disorder prediction 753 789 - -
Pvu4g1366 789 MobiDBLite consensus disorder prediction 240 270 - -
Pvu4g1366 789 Gene3D DnaJ domain 63 183 IPR036869 -
Pvu4g1366 789 MobiDBLite consensus disorder prediction 311 330 - -
Pvu4g1366 789 Coils Coil 301 328 - -
Pvu4g1366 789 Pfam Domain of unknown function (DUF3444) 468 675 IPR024593 -
Pvu4g1366 789 PRINTS DnaJ domain signature 68 86 IPR001623 -
Pvu4g1366 789 PRINTS DnaJ domain signature 86 101 IPR001623 -
Pvu4g1366 789 PRINTS DnaJ domain signature 102 122 IPR001623 -
Pvu4g1366 789 PRINTS DnaJ domain signature 122 141 IPR001623 -
Pvu4g1366 789 MobiDBLite consensus disorder prediction 137 172 - -
Pvu4g1366 789 SMART dnaj_3 65 122 IPR001623 -
Pvu4g1366 789 MobiDBLite consensus disorder prediction 135 181 - -
Pvu4g1366 789 CDD DnaJ 66 119 IPR001623 -
Pvu4g1366 789 MobiDBLite consensus disorder prediction 737 789 - -
Pvu4g1366 789 PANTHER BNAA04G14940D PROTEIN 1 697 - -
Pvu4g1366 789 MobiDBLite consensus disorder prediction 311 368 - -
Pvu4g1366 789 ProSitePatterns Nt-dnaJ domain signature. 107 126 IPR018253 -
Pvu4g1366 789 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Pvu4g1366 789 Pfam DnaJ domain 66 127 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1366 Pvu-Chr4 40497372 40499874 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g1366 4 345 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 30.878 5.34e-34 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1366 - - gmx:100816712 1247.26