Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1357 ATGGCTTCCCTTGCAGCTTCCACTGCTGCTGCATCCCTTGGCATGTCAGAAATGCTTGGAAACCCCATCAACCTCAATGGTGCCACAAGGCCTGCTCCATCTCCCTCTAGCCCTGCCTCCTTCAAGACTGTGGCTCTTTTCTCCAAAAAGAAGGCAGCACCAAAAAAAGCTGCTCCTGTCTCTCCTGCCAATGATGAGCTTGCCAAGTGGTATGGTCCTGACAGAAGGATCTTCTTGCCAGAGGGTCTCTTGGACCGATCTGAGGTCCCGGAGTACTTGAATGGAGAAGTCCCCGGAGATTATGGTTATGACCCCTTTGGTCTCGGCAAGAAGCCAGAGGACTTTGCCAAATATCAGGCATTTGAGTTGATTCACGCCAGATGGGCAATGCTTGGTGCTGCTGGATTCATCATTCCTGAGGCCTTCAACAAATACGGAGCAAACTGTGGTCCTGAGGCTGTTTGGTTCAAGACTGGAGCTCTGCTTCTTGATGGGGGTACGTTGAACTACTTTGGGAAACCCATTCCCATCAATCTTATTCTGGCTGTCGTTGCTGAGGTAGTTCTTGTGGGAGGTGCAGAGTACTACAGAATTACTAATGGCCTGAATTTCGAAGACAAACTTCATCCAGGTGGTCCATTTGATCCATTGGGGCTTGCAAACGATCCAGATCAAGCTGCACTGCTAAAGGTGAAGGAAATCAAGAATGGTAGACTTGCTATGTTTTCCATGCTTGGTTTCTTCATCCAAGCCTATGTCACTGGAGAAGGTCCTGTTGAGAACCTTGCAAAGCATCTCAGTGACCCATTTGGCAACAACTTGCTCACAGTCATTGCTGGAACAGCTGAGAGAACTCCAACTCTCTAA 867 0.4879 MASLAASTAAASLGMSEMLGNPINLNGATRPAPSPSSPASFKTVALFSKKKAAPKKAAPVSPANDELAKWYGPDRRIFLPEGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFAKYQAFELIHARWAMLGAAGFIIPEAFNKYGANCGPEAVWFKTGALLLDGGTLNYFGKPIPINLILAVVAEVVLVGGAEYYRITNGLNFEDKLHPGGPFDPLGLANDPDQAALLKVKEIKNGRLAMFSMLGFFIQAYVTGEGPVENLAKHLSDPFGNNLLTVIAGTAERTPTL* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1357 288 Pfam Chlorophyll A-B binding protein 90 251 IPR022796 -
Pvu4g1357 288 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 1 288 - -
Pvu4g1357 288 Gene3D Chlorophyll a/b binding protein domain 77 288 - -
Pvu4g1357 288 SUPERFAMILY Chlorophyll a-b binding protein 69 279 - -
Pvu4g1357 288 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 288 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1357 Pvu-Chr4 40404463 40406992 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g1357 11 288 Chloroplast and Mitochondria Gene Families AT4G10340 85.305 7.32e-159 442
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1357 K08916 - gmx:100806585 508.834
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g1357 4 40404463 40406992 Pvu4g1357 4 40404463 40406992 ECH
Pvu4g1357 4 40404463 40406992 Pvu7g1157 7 14833099 14835599 PCT