Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1356 ATGGCTTGTTCAGTGCATCTCCTTCCACTCCTCTTCTCCCTCATGGTTTTGCTCTTCAACCCAACATGTGTATGTGGCAATGACGAGCTTAAAGCTCTGATGGACCTGAAATCCAGTTTGGATCCAGAGGGGCAGTTTCTGTCCTCATGGACCTTGGATGGCAACGCCTGTGGTGGTTACTTTGAGGGAGTGGCTTGCAATGAGATGGGTCAGGTGGCAAATGTTTCTCTGCAGGGGAAAGGTCTCTCTGGGAGGCTTTCACCAGCCATTGCTGGACTTAAGCACTTGACAGGACTCTACTTGCATTACAATTCTTTGTATGGGGAGATTCCAAGGGAAGTTGCAAACTTGACTGAGCTCAGTGACTTGTACCTGAATGTGAATCATTTGTCTGGTGAAATCCCACCTGAGATTGGCAGGATGGAGAATCTTCAAGTTTTGCAGCTTTGTTATAATCAGTTAACAGGAAGTATACCTACACAGCTTGGTGATTTGAAAAAGCTCAGTGTTCTTGCTCTTCAGTCAAACCAGTTGGCTGGAGCTATCCCTGCTATTCTAGGTGATTTGGGAATGTTGACGAGGCTAGATTTGAGTTCTAATAGTCTCTTTGGTTCCATTCCCACTAAGCTAGCTAATCTTCCTTCACTGCAAGTTCTGGATGTTCACAACAATACTCTCTCTGGGAATGTACCCACTGCTTTAAAGAGACTAGAGGGTGGATTTGTGTATGAACACAATGTGGGGTTATGTGGAGTTGGGTTTTCATCCTTGAAGGCTTGCACTGCTTCAGGTAATGTCAATCTCACTCGACCTGAACCTTATGGAGCAGGAGTTGGCAGTAGTATCACTAGAGATATCCCAGAAACTGCTAATGTCAAGTCGCCTTGCAATACATCTCATTGCCAAAATCCATCAAAATCCAAACAAGCCACATCTATTACAGTTGGCATAGTTCTAGCAACAATTGCAATATCAGCAATTGGTATTTTGACCTTCACTATGTATCGTCGGCAGAAACAAAAGCTTGGAAGTGCTTTTGATATCTCTGAAGGCCGACTGAGTACAGAGCAAGCAAAGAGTATATACAGGAAAAATGGATCTCCTTTGGTTAGCCTTGAGTATTCTAATGGGTGGGACCCTTTGGCTGATAGCAGGAATTTCAACGGAGATAAGCAAGATTTGTTCCAGAGTTTCAGGTTCAACTTGGAAGAAGTGGAGTCAGCTACTCAGTATTTCTCAGAGTTGAATCTGCTGGGGAAGAGCAACTTTAGTGCAACATATAAAGGGGTTTTAAGAGATGGGTCTGCTGTTGCTGTCAAGAGCATCAGTAAAACTAGTTGCAAATCAGATGAAGCTGAGTTTTTGAAGGGATTGAACATTTTGACCTCTCTGAGAAATGAACATTTAGTGAGGTTGAGAGGATTTTGTTGCTCAAGGGGACGAGGGGAATGCTTCTTGGTTTATGATTTTGTTCCTAATGGAAACCTGACACGCTACCTTGATGTGAAGGAAGGTGATGGAGAAGTTCTTGAATGGTCAACTAGAATTTCTATTGTGAAAGGGATTGCTAAAGGTATAGCATATTTACATGCACACAAAGCAAACAAACCAGCCCTTGTTCACCAAAACATCTCAGCTGAGAAAGTGCTAATCGATCAGCGGTACAACCCAATGCTTTCAGATTCGGGCCTGTACAAGCTTCTCACCAATGACATTGTCTTCTCTGCACTAAAGGGTAGTGCAGCAAAGGGATACCTGGCTCCAGAATACACCACAACCGGCCGGTTCACAGAGAAAAGTGATGTTTACGCATTTGGAGTGCTTCTTTTCCAGATTATCACAGGGAAACAGAAGATCACAAGTGCAATGCGCCTTGCAGCAGAGTCCTTCACGTTTCAAGAATTTATTGACCCGAACTTGCGTGGCAAGTTCTTTGAATATGAGGCAGCTAAACTAGCAAGAATGGCGTTACTTTGCTCCCATGAGTCTCAATTTGAGAGGCCAAGCATGGAAGCCATTGTTCAAGAACTGGGGAATTGTAGTAGCTGTCTCTGA 2055 0.438 MACSVHLLPLLFSLMVLLFNPTCVCGNDELKALMDLKSSLDPEGQFLSSWTLDGNACGGYFEGVACNEMGQVANVSLQGKGLSGRLSPAIAGLKHLTGLYLHYNSLYGEIPREVANLTELSDLYLNVNHLSGEIPPEIGRMENLQVLQLCYNQLTGSIPTQLGDLKKLSVLALQSNQLAGAIPAILGDLGMLTRLDLSSNSLFGSIPTKLANLPSLQVLDVHNNTLSGNVPTALKRLEGGFVYEHNVGLCGVGFSSLKACTASGNVNLTRPEPYGAGVGSSITRDIPETANVKSPCNTSHCQNPSKSKQATSITVGIVLATIAISAIGILTFTMYRRQKQKLGSAFDISEGRLSTEQAKSIYRKNGSPLVSLEYSNGWDPLADSRNFNGDKQDLFQSFRFNLEEVESATQYFSELNLLGKSNFSATYKGVLRDGSAVAVKSISKTSCKSDEAEFLKGLNILTSLRNEHLVRLRGFCCSRGRGECFLVYDFVPNGNLTRYLDVKEGDGEVLEWSTRISIVKGIAKGIAYLHAHKANKPALVHQNISAEKVLIDQRYNPMLSDSGLYKLLTNDIVFSALKGSAAKGYLAPEYTTTGRFTEKSDVYAFGVLLFQIITGKQKITSAMRLAAESFTFQEFIDPNLRGKFFEYEAAKLARMALLCSHESQFERPSMEAIVQELGNCSSCL* 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1356 684 ProSiteProfiles Protein kinase domain profile. 412 684 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu4g1356 684 Gene3D Ribonuclease Inhibitor 23 294 IPR032675 -
Pvu4g1356 684 Gene3D Phosphorylase Kinase; domain 1 383 490 - -
Pvu4g1356 684 SUPERFAMILY Protein kinase-like (PK-like) 391 677 IPR011009 -
Pvu4g1356 684 PANTHER PROTEIN NSP-INTERACTING KINASE 2-LIKE 4 682 - -
Pvu4g1356 684 SMART LRR_typ_2 189 212 IPR003591 -
Pvu4g1356 684 SMART LRR_typ_2 213 236 IPR003591 -
Pvu4g1356 684 SMART LRR_typ_2 117 141 IPR003591 -
Pvu4g1356 684 SMART LRR_typ_2 93 116 IPR003591 -
Pvu4g1356 684 SMART LRR_typ_2 165 188 IPR003591 -
Pvu4g1356 684 SUPERFAMILY L domain-like 23 236 - -
Pvu4g1356 684 Gene3D Transferase(Phosphotransferase) domain 1 491 683 - -
Pvu4g1356 684 Pfam Protein tyrosine and serine/threonine kinase 416 677 IPR001245 GO:0004672|GO:0006468
Pvu4g1356 684 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 4 682 - -
Pvu4g1356 684 Pfam Leucine rich repeat N-terminal domain 27 67 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1356 Pvu-Chr4 40384285 40388198 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g1356 10 525 Miscellaneous Gene Families AT4G22730 55.619 0.0 576
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Pvu4g1356 PK_Tyr_Ser-Thr 1.7e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1356 - - gmx:100789253 1229.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g1356 4 40384285 40388198 Pvu7g1148 7 14476334 14479522 PCT