Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1347 ATGGAGGAAAGAGAGATTTTTAGTTCTGGGCAGGCTGTTAAGGTTGTCGAGCCTCCCCAGAGCTTCCACGTGGCACTAAGCTCCGTGCAGTTTTCTGGGCCCACGGTGGATTCGCCGGCACCGGTGAGTGCTCCGGTGATTACTTCCGGTAGTACAGATGGGAAGAAGAAGAGGGGCCGGCCTAGGAAATATGGACCAGACGGCAATGTGGCGCTGTCGCCGATGCCGATATCGTCGTCGATTCCATTGACCGGAGACTTCTCAGCCTGGAAAAGGGGCAGAGGAAAGCCAGCTGAATCAATCAAGAAGTCTTTCAAGTTTTATGATGTTGAAGGTCAAGGTGCAGGACCAGGCGATCAAATTGCATACTCAGTTGGTGCCAATTTCACACCTCACATCCTTATAGTAAATGCTGGCGAGGATGTTACTATGAAGATTATGTCCTTCTCTCAGCAAGGATGTCAGGCGATCTGTGTGCTCTCTGCAAACGGTACAATTTCAAATGTTACACTACGCCAACCAACTTCTTCTGGTGGTACTTTAACATATGAGGGACGCTTTGAAATTATTTCCTTGACTGGTTCATATATGCCAACTGAGAATGGGTTTACAAAGAGCAGATCTGGTGGGATGAGCATCTCTTTGGCCGGGCCAGATGGTCGAGTAATGGGGGGTGGACTGGCTGGTTTGCTGGTAGCTGCTGGTCCTGTGCAGGTTGTTGTGGCTAGTTTTGTTCCTGGTCACCAGCTGGAGCAGAAACCGAAGAAGACAAGGGTGGAGCATGTACCAATGACTGCCCCTGTCCCTGCCCCTGCCCCTATACCCGTCAACTCCACTTCTGCTGAAGATATAAGAATTGATCTTGGTGGAGTAAAGCCAATCTTGACACCAGCTGCTTTTCAAATGGACAGTATCTTTGGCAATGGACAACTGTCTGATGATGAGGCTCCTTTCCCTGAAGATGAGCCTAACACAAGTTATGCAGATGCTGGAGTTGCTAGCTAA 1005 0.4945 MEEREIFSSGQAVKVVEPPQSFHVALSSVQFSGPTVDSPAPVSAPVITSGSTDGKKKRGRPRKYGPDGNVALSPMPISSSIPLTGDFSAWKRGRGKPAESIKKSFKFYDVEGQGAGPGDQIAYSVGANFTPHILIVNAGEDVTMKIMSFSQQGCQAICVLSANGTISNVTLRQPTSSGGTLTYEGRFEIISLTGSYMPTENGFTKSRSGGMSISLAGPDGRVMGGGLAGLLVAAGPVQVVVASFVPGHQLEQKPKKTRVEHVPMTAPVPAPAPIPVNSTSAEDIRIDLGGVKPILTPAAFQMDSIFGNGQLSDDEAPFPEDEPNTSYADAGVAS* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1347 334 Gene3D - 131 263 - -
Pvu4g1347 334 SUPERFAMILY AF0104/ALDC/Ptd012-like 128 251 - -
Pvu4g1347 334 MobiDBLite consensus disorder prediction 31 71 - -
Pvu4g1347 334 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 3 7 316 - -
Pvu4g1347 334 MobiDBLite consensus disorder prediction 31 50 - -
Pvu4g1347 334 MobiDBLite consensus disorder prediction 310 334 - -
Pvu4g1347 334 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 7 316 IPR039605 GO:0003680
Pvu4g1347 334 Pfam Plants and Prokaryotes Conserved (PCC) domain 131 245 IPR005175 -
Pvu4g1347 334 ProSiteProfiles PPC domain profile profile. 126 265 IPR005175 -
Pvu4g1347 334 CDD DUF296 130 244 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1347 Pvu-Chr4 40275694 40281744 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g1347 38 281 AT-hook Motif Nuclear Localized (AHL) Family AT4G25320 53.571 3.65e-87 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1347 - - gmx:102667678 501.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g1347 4 40275694 40281744 Pvu7g1143 7 14360489 14367811 ECH
Pvu4g1347 4 40275694 40281744 Pvu4g1347 4 40275694 40281744 ECH
Pvu4g1347 4 40275694 40281744 Pvu7g1143 7 14360489 14367811 PCT