Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1323 ATGATCCGAGAGCTAGTGATCACATCCATGGCTTTCTATAGCATTTTCTTCCTCTTAATCCTTCTTAGCTTCCTCACTTTTGCAACTCCTCAGGAAGATGCCAACTCCGACCCTGTCTATCTATACCATAATTGCTCTGGAGGCAAAACTACAGATGACAGCACCTTCCAATCCAATCTCAAGATCCTATTCTCCTCCTTAATAGATAACGCCCCCGACAACAACGGATTCTATAACAACACAGTCTCTCCACAAAATTCCTCGGACTCTCTCTTTGGACTTTTTATGTGTAGGGGTGACGTCCCTTCTCAGCTTTGTCAACAATGTGTCCAAAATGCAACCCAACGATTATCCTTGGATTGCTCGTTGGCCAAGCAAGCTGTGATTTGGTACGATGAGTGCACTGTTCGTTACTCCAACACCTCGTTCTTCTCTACTGTGTCCATCAGACCTAGGCTTGCTCTGTATAACATTGTTAATATCTCAAACAAGGAAAGTTTCATGTCTTTATTGTTCCAGACCATGAACAAAACTGCAGATGATGCTGCTGTTGGTAAAAAGTTTGCTACAAGGGAAGCAAATATTTCTGAATTTCAGAATGTTTATTGTCTAGCTCAGTGTACTCCGGACCTATCACCCAATGATTGCAGAAGGTGTCTAAGTGCAGTGATAGGGGATCTTCCATGGTGCTGCCAAGGGAAGCAAGGAGGGAGAGTTTTGTATCCAAGCTGTAATGTTAGGTATGAACTCTACCCTTTCTATCGCTCCATTAATATTACTTCTACACCAGCGTGGGTTCCTGCATCAAAATTTGGATATGCAGATTCAAGATTTTCAGAAGATCCAACTTATCTAAACCACAGTTGCTCAACTAATGTAACAGCTGACAGCACTTTCAAAATGTATCTAGAGATCCTCTTCTCTTACATGTCTTCCAATGCCACTAATGGCAAAATCTCTTACAAGGGCGGTGTGGAGAATACTGTGAATGGGCTCTTCATGTGCCAAGGTGGTCTCCCATCTCGGCTTTGTGAAAAATGCGTCCTCAATGCAACCCACCTAATATCCTTAGAGTGCAATGCGTTTCAAGAGGCTGTAATTTGGTACAGCCACTGCATGCTTCGCTATTCCAATCGCTATTTCTTCTCCCAAGTGGAAAAAAGTCCAACTTTTCAAATGTTGAACGCCACCAGTGCCTTCAGCCTCGCCCCTGAGCAAGGGTTCTTCACCTTTACATTATCAAATTTGTTGGCTAATCTGGCGAAAGAGACACGGGATAGTGATGAGAGATATTTGATAAAATCATCGAAGTTGAATGATTTACAAACCCTTTATGCACTTAGCCAATGTACACAGGATTTGTCTAGTGATGATTGTAGGGGCTGTTTGGAAGATATAATTGGAAATATCCCTTGGTCTCTCTTGGGAAGCGTGGGGGGAAGAGTTTTGTATCCCAGTTGTAATCTCAGATTTGAATTGTTCCAATTTTTCTGGGTTCCTGACCAACTTCAACGGCCAACATCCGATGATCCTTCTCCATCATCCCATAACGAAAAAGGAAAAGCACACTTGCGAACAATCATCTTGATTATTGCAGCTATGGTTGTTTCAACAATACTCTTCTTTTTGGGCTACTATTTGATAAAGAGCAAAGCAAGAAAAAGTGTTAAGACTATTCTAAAAGAAAATTTTGGTCAAGAAAGTGTCATTTTAGAGCCAATGCAATTTAGTTTGGCAGTAATTAAAGCCGCAACCAACAACTTTTCAAGTGAAAATAGAATTGGAAAAGGTGGATTTGGAGAAGTTTATAAGGGTATTCTCCTTGATGATCGACAAATAGCGGTAAAGAAACTCTCAAAAAGTTCTAAGCAAGGTGAAAATGAATTCAAGAATGAAGTTTTATTGATAGCCAAACTTCAACACAGAAATCTTGTGACATTCATTGGCTTTTGCCTTGAAGACCAAAACAAAATACTTATTTATGAATATGTGCCGAACAAGAGTCTTGACTATTTTTTATTTGATTCTCAACAAGCAATTTTGTTAAGGTGGTCGGAAAGATATAACATAATTGGAGGGATTGCTGGAGGAATTCTTTATTTACATGAATATTCTCGACTCAAAGTCATACATCGTGATCTTAAACCTAGTAATGTTTTATTGGATGAAAACATGATTCCAAAAATTTCAGATTTTGGTTTGGCTAGAATTATTGAAACACATCAAGACCAAGCGAGTACAAATAGAATTGTAGGAACATATGGTTACATGTCTCCAGAATATGCAATGCTCGGACATTTTTCAGAAAAATCAGATGTTTTTAGTTTTGGAGTAATGGTTTTAGAGATTATTAGTGGAAAAAGGAATACAAATTCTTTTAATCAACCACATGGTATGGGTGACGGCCTCTTAAGTTATGTTTGGAGACAATGGAGGGATCAAACTATGTGCATATTAGACCCCACTATTAAAGAAAAATATTCTGAACAAGAAGTTATTAGATGCACTCAAATTGGTTTATTGTGTGTTCAGCAAAATCCTGATGCAAGACCAACAATGATGGAAGTTGTTTCATACCTTAGCAATCATTTGATTGAATTGCCAAATCCAGACGAACCTGCATTTTTCTTGCATGGAAGAATGGATTCAAAATCATTTCCTCATTCCAAACAACATAGCGATGGTTGCACTCCATTTTCCATTAGTGAAATGCCAACGAGTCAATTTCTTCCTCGATAA 2739 0.3888 MIRELVITSMAFYSIFFLLILLSFLTFATPQEDANSDPVYLYHNCSGGKTTDDSTFQSNLKILFSSLIDNAPDNNGFYNNTVSPQNSSDSLFGLFMCRGDVPSQLCQQCVQNATQRLSLDCSLAKQAVIWYDECTVRYSNTSFFSTVSIRPRLALYNIVNISNKESFMSLLFQTMNKTADDAAVGKKFATREANISEFQNVYCLAQCTPDLSPNDCRRCLSAVIGDLPWCCQGKQGGRVLYPSCNVRYELYPFYRSINITSTPAWVPASKFGYADSRFSEDPTYLNHSCSTNVTADSTFKMYLEILFSYMSSNATNGKISYKGGVENTVNGLFMCQGGLPSRLCEKCVLNATHLISLECNAFQEAVIWYSHCMLRYSNRYFFSQVEKSPTFQMLNATSAFSLAPEQGFFTFTLSNLLANLAKETRDSDERYLIKSSKLNDLQTLYALSQCTQDLSSDDCRGCLEDIIGNIPWSLLGSVGGRVLYPSCNLRFELFQFFWVPDQLQRPTSDDPSPSSHNEKGKAHLRTIILIIAAMVVSTILFFLGYYLIKSKARKSVKTILKENFGQESVILEPMQFSLAVIKAATNNFSSENRIGKGGFGEVYKGILLDDRQIAVKKLSKSSKQGENEFKNEVLLIAKLQHRNLVTFIGFCLEDQNKILIYEYVPNKSLDYFLFDSQQAILLRWSERYNIIGGIAGGILYLHEYSRLKVIHRDLKPSNVLLDENMIPKISDFGLARIIETHQDQASTNRIVGTYGYMSPEYAMLGHFSEKSDVFSFGVMVLEIISGKRNTNSFNQPHGMGDGLLSYVWRQWRDQTMCILDPTIKEKYSEQEVIRCTQIGLLCVQQNPDARPTMMEVVSYLSNHLIELPNPDEPAFFLHGRMDSKSFPHSKQHSDGCTPFSISEMPTSQFLPR* 913
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1323 912 ProSiteProfiles Gnk2-homologous domain profile. 281 381 IPR002902 -
Pvu4g1323 912 MobiDBLite consensus disorder prediction 890 912 - -
Pvu4g1323 912 Gene3D Phosphorylase Kinase; domain 1 548 663 - -
Pvu4g1323 912 ProSiteProfiles Gnk2-homologous domain profile. 149 253 IPR002902 -
Pvu4g1323 912 SUPERFAMILY Protein kinase-like (PK-like) 570 885 IPR011009 -
Pvu4g1323 912 Pfam Salt stress response/antifungal 163 251 IPR002902 -
Pvu4g1323 912 Pfam Salt stress response/antifungal 408 492 IPR002902 -
Pvu4g1323 912 Pfam Salt stress response/antifungal 45 140 IPR002902 -
Pvu4g1323 912 Pfam Salt stress response/antifungal 289 378 IPR002902 -
Pvu4g1323 912 ProSiteProfiles Gnk2-homologous domain profile. 387 496 IPR002902 -
Pvu4g1323 912 ProSitePatterns Serine/Threonine protein kinases active-site signature. 709 721 IPR008271 GO:0004672|GO:0006468
Pvu4g1323 912 CDD STKc_IRAK 594 860 - -
Pvu4g1323 912 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 515 883 - -
Pvu4g1323 912 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 29 265 - -
Pvu4g1323 912 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 275 502 - -
Pvu4g1323 912 ProSiteProfiles Gnk2-homologous domain profile. 38 143 IPR002902 -
Pvu4g1323 912 Gene3D - 282 381 IPR038408 -
Pvu4g1323 912 Gene3D - 152 253 IPR038408 -
Pvu4g1323 912 Gene3D - 37 143 IPR038408 -
Pvu4g1323 912 Gene3D - 392 496 IPR038408 -
Pvu4g1323 912 ProSiteProfiles Protein kinase domain profile. 588 865 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu4g1323 912 SMART serkin_6 588 860 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu4g1323 912 ProSitePatterns Protein kinases ATP-binding region signature. 594 617 IPR017441 GO:0005524
Pvu4g1323 912 Gene3D Transferase(Phosphotransferase) domain 1 664 868 - -
Pvu4g1323 912 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 275 502 - -
Pvu4g1323 912 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 29 265 - -
Pvu4g1323 912 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 515 883 - -
Pvu4g1323 912 Pfam Protein kinase domain 589 858 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu4g1323 912 MobiDBLite consensus disorder prediction 886 912 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1323 Pvu-Chr4 40020515 40028081 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g1323 279 912 Receptor kinase-like Gene Family AT4G05200 40.701 5.57e-162 488
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pvu4g1323 Pkinase 2.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1323 - - gmx:100798426 1284.24