Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1316 ATGCCATCCCGACAACTCTCCACCTCAACAGACACACCGCCACGTCATCACCACCACCACCACTTTTTCATTCCTCTCATCACCGCCACTGTCTCCACCTTCACACTCCTCCTTTTTCTCCTCTTCCTGCTCTGCCACCGCATCCTCACGCGCAAACGTGCCACCCGGTCTCCTCCTCCTCCTTCTTCATCCTCCCCCCCGCACCGCCTCTCCTTTTCCGTCCTCCGCCGCGCCACCAATTCCTTCTCCTCCCGCCTCGGCCATGGTGGCTTCGGCCCCGTATTCGCCGGCGCTCTCGCCGGAGTCCCCGTCGCTGTCAAGCTCATGGACTCCACCTCCTCCCAGCAGGGCGAGCGCGAGTTCCACAACGAGCTCTTCTTCGCCTCCAAGCTCCTCTCTCGCCACGTCATCACCGCCACGCATTTCTCCTCTGACCCCAAACGACGCCGCTTCCTCTTGGTCTACGAGCTCATGCAAAACGGTAACCTCCAAGACGCGCTTTTGCACCGCAAGTGCCCCGAACTCGCAAACTGGAACACCCGCTTCTCGATTATTCTCAACATAGCCAAAGGAATTCACTTTCTCCACTCCTGTGACCCCCCTGTTATCCACGGCGACATAAAGCCGAGTAACGTTTTGCTTGATCGCGATTTCTCGCCCAGAATTGGCGATTTTGGGTTGGCCAGGTTGAGCTCGGAGCCTCCCAGGTTTGAAATTGACGTTCTGGAGTGTGGTAGTGTTAATAATGATGAAGAGAAGAAGAAGATGAAGGAGGAGGAGGTTGATGATTGCGGATCGGTGGCGAGTACTCACAGTGTTTTTATGGAAGAAGGTAGCTTGGGGGTGGAGCAATCTCCTTCGCCAGAGACTGCGGTGATGATGGCGATGACTTCGCCAGAGACGGGTTTAGCGGTGGCAGCGGCGTCGCCGGGGTTTGAGAAGGAGGACGCGAAGAAGATGAATGGGAAAGGGTTGAAGAGTAATTCGGTGAGGGATTGGTGGTGGAAGCATGAGAATGATGTTGGGAGTGGGGAGAGTAAGAAGGTTAGGGATTATGTGATGGAGTGGATTGGGAGGGATGTGAATAAGGAAAGGGTGAAGGGTGGAATTGAGTATGGGGATGTGGAGATGGGGAAGGAAGAGGCTAAGAAGAAGAAGAAGAAGAAGAGAAGGGGGAAGGAACTGGAATGGTGGGAGTCAATGGAAGAGGAGAAGTTTGATGGGGTTGTGAAGGGGAAGAGAAGGACCGTGAGGGAGTGGTGGAAAGATGAGTGTTTCGAGGAAAATGAAAATAAGAATAAGAATAAGAAGAAGAAGAAGAAGAAGAAGAGGAAGGGTGGGGGTGAAAAGAGTGATGATATTGAGAATGGTGATGATTGGTGGGTGAGTGATGATGGATTGGATAAGAGGAAGGGCAAGAGTAGGAGTAGGAACAACCGTGGGAACATGGATTGGTGGATGGATGGTTTGAGTGGTGAGTTATGGAGAGGAAGGAGGAATAATAGCTTTGATTCTGCTAGTGGGGAGATTCCAAAGAGTGGTGGTGTTAGCAGTACTCCTAGTATGAGGGGAACTGTGTGTTATGTTGCTCCTGAGTGTGGCTATGGTGGGGATGTGACTGAGAAGTGTGATGTGTATAGCTTTGGGGTGTTGTTGCTTGTGATAATTTCTGGGCGGCGCCCACTTCAAGTGAGTGGTTCGCCCTTGTCTGAGTTTCAGAGAGCGAATCTACTTTCCTGGGCACGCCATTGTGCACGAAATGGGAAGCTTTTTGAGCTGGTTGATGAGTCTTTGCAGTTGTTGGATAAGGAGCAGGCTCTTCTCTGCATCAAGGTGGCTTTGCTTTGTCTGCTGAAGTCACCTGCTCGTCGTCCTTCATTGAAGGAGGTTGTGGGGATGCTTAGTGGGGAGTTGGAACCACCCCAATTGCCTGTTGAATACTCTCCTTCAACCCCTTCTCGCTACCCTTTCAAATCTAGGAGAAAAGGCAGAGCCATGCTGGTAATACCAGAATATTGGAACTTGAAATGGTTAAATTCTTTGAAGCAGAATCTTTCTATAAGCTTTTCTCATGTGATTGTGTTAATGGTTGTAATAGAAAAATGGGGAACTCTTGCCCAAAGATACTATATTTGGTAA 2139 0.5077 MPSRQLSTSTDTPPRHHHHHHFFIPLITATVSTFTLLLFLLFLLCHRILTRKRATRSPPPPSSSSPPHRLSFSVLRRATNSFSSRLGHGGFGPVFAGALAGVPVAVKLMDSTSSQQGEREFHNELFFASKLLSRHVITATHFSSDPKRRRFLLVYELMQNGNLQDALLHRKCPELANWNTRFSIILNIAKGIHFLHSCDPPVIHGDIKPSNVLLDRDFSPRIGDFGLARLSSEPPRFEIDVLECGSVNNDEEKKKMKEEEVDDCGSVASTHSVFMEEGSLGVEQSPSPETAVMMAMTSPETGLAVAAASPGFEKEDAKKMNGKGLKSNSVRDWWWKHENDVGSGESKKVRDYVMEWIGRDVNKERVKGGIEYGDVEMGKEEAKKKKKKKRRGKELEWWESMEEEKFDGVVKGKRRTVREWWKDECFEENENKNKNKKKKKKKKRKGGGEKSDDIENGDDWWVSDDGLDKRKGKSRSRNNRGNMDWWMDGLSGELWRGRRNNSFDSASGEIPKSGGVSSTPSMRGTVCYVAPECGYGGDVTEKCDVYSFGVLLLVIISGRRPLQVSGSPLSEFQRANLLSWARHCARNGKLFELVDESLQLLDKEQALLCIKVALLCLLKSPARRPSLKEVVGMLSGELEPPQLPVEYSPSTPSRYPFKSRRKGRAMLVIPEYWNLKWLNSLKQNLSISFSHVIVLMVVIEKWGTLAQRYYIW* 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1316 712 Gene3D Transferase(Phosphotransferase) domain 1 497 641 - -
Pvu4g1316 712 Gene3D Transferase(Phosphotransferase) domain 1 158 268 - -
Pvu4g1316 712 Pfam Protein tyrosine and serine/threonine kinase 520 633 IPR001245 GO:0004672|GO:0006468
Pvu4g1316 712 Pfam Protein tyrosine and serine/threonine kinase 82 231 IPR001245 GO:0004672|GO:0006468
Pvu4g1316 712 SMART serkin_6 80 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu4g1316 712 Coils Coil 422 442 - -
Pvu4g1316 712 ProSitePatterns Serine/Threonine protein kinases active-site signature. 202 214 IPR008271 GO:0004672|GO:0006468
Pvu4g1316 712 MobiDBLite consensus disorder prediction 431 455 - -
Pvu4g1316 712 PANTHER OS07G0586332 PROTEIN 1 664 IPR044576 -
Pvu4g1316 712 SUPERFAMILY Protein kinase-like (PK-like) 58 658 IPR011009 -
Pvu4g1316 712 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 664 - -
Pvu4g1316 712 ProSiteProfiles Protein kinase domain profile. 80 643 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu4g1316 712 Gene3D Phosphorylase Kinase; domain 1 56 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1316 Pvu-Chr4 39898990 39901598 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g1316 43 243 Receptor kinase-like Gene Family AT4G23130 36.574 3.38e-30 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Pvu4g1316 PK_Tyr_Ser-Thr 2.4e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1316 - - gmx:100803379 1073.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g1316 4 39898990 39901598 Pvu7g0656 7 5654511 5656702 PCT