Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1310 ATGTCCAATGAAACGGTTGACCCCTACCACTATCTCCAAATCCTCCGCAACCCCGACGGCACCTTCACTCGCCTCAACGACGCCGTTCCACGCACCCCACCTTCTTCAGACCCATCTCTTCCCATTCCAGTTCTCACCAAAGACATCGTCATCAACCCACAAACCCTTACCTGGCTACGCTTATTCCTACCACGGACAGCACTATCCTCTTCCGACCCCAACAAGCTTCCTCTCATTCTTTTCTTTCACGGAAGCGGATTCGTGCTGCTCAGTGCGGCTTCCTCCATGTTCCATGATTTCTGCGTCCAAATGGCCAATTCCGCTCAGGCCGTCGTCGCCTCCATCGACTACCGCCTCGCGCCGGAGCACCGGCTTCCGGCGGCCTACGACGACGGCGTGGAAGCGCTGCGGTGGATCGGAAAGTGTGAAGATAATTGGTTGACGCAATATGCGGATTATTCAAAGTGTTATCTTATGGGGAATAGCGCTGGGGCCACTATCGCCTACCACGCAGGTGTACGTGCAGTTGAAGAGGTGAATGATCTTGGTGCAGTGAAGATCGAAGGGTTGATATTGCGTCAACCATTCTTTGGTGGAAGGCAGAGGACAGAGTCAGAGTTAAGGCTTGAGAATAACCCACTCATTCCATTGTGTGTTACGGATTTGATGTGGGAACTGGCACTGCCATTTGGTGCTGATCGTGACCACGAATATTGCAATCCAAGGGCTGGAAATGGGGTTCAGAAATTTGACAGGATGAGGGAGCTTGGTTGGAGGGTACTGATGAGTACCAACAATGGTGACCCATTGGTGGATCGTGAGAAGGAGTTGGCACAATTGATGGAAGAAAAAGGGGTGCAAGTGGTCAAGGATTTTCAAGAAGAAGGCTTCCATGGAATTGAACTTTTTGAGCCACTCAAAGCAAACCAATTCATTTCTTTGGTTAAAGATTTCATTTACCCAATCTCTATTTAG 975 0.5015 MSNETVDPYHYLQILRNPDGTFTRLNDAVPRTPPSSDPSLPIPVLTKDIVINPQTLTWLRLFLPRTALSSSDPNKLPLILFFHGSGFVLLSAASSMFHDFCVQMANSAQAVVASIDYRLAPEHRLPAAYDDGVEALRWIGKCEDNWLTQYADYSKCYLMGNSAGATIAYHAGVRAVEEVNDLGAVKIEGLILRQPFFGGRQRTESELRLENNPLIPLCVTDLMWELALPFGADRDHEYCNPRAGNGVQKFDRMRELGWRVLMSTNNGDPLVDREKELAQLMEEKGVQVVKDFQEEGFHGIELFEPLKANQFISLVKDFIYPISI* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1310 324 PANTHER ARYLACETAMIDE DEACETYLASE 3 319 - -
Pvu4g1310 324 Gene3D alpha/beta hydrolase 9 321 IPR029058 -
Pvu4g1310 324 PANTHER RECEPTOR GID1, PUTATIVE-RELATED 3 319 - -
Pvu4g1310 324 SUPERFAMILY alpha/beta-Hydrolases 34 319 IPR029058 -
Pvu4g1310 324 Pfam alpha/beta hydrolase fold 79 300 IPR013094 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1310 Pvu-Chr4 39728505 39732312 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g1310 34 298 Carbohydrate Esterase AT1G68620 38.889 5.67e-54 178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1310 - - var:108344974 539.265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g1310 4 39728505 39732312 Pvu7g0660 7 5697794 5699279 PCT
Pvu7g0661 7 5701837 5703202 Pvu4g1310 4 39728505 39732312 PCT