Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1304 ATGGGTAAGGAGGGGTATTTTGCTGGAAGAACATCAAAGAGAGGTGTTGTGGTAGGAAGAGGAGGAGGGGATGCTGAAACACAAGTCCCTTCTGGTTGCATGTGTGCTGTTTTTCAGTTCTTTGATTTCCATCCCTTTCATTTTCCCAACATAAACCAACAACAAACCTCTTTCAAACCACCCTCATGCACTTTAGAAGACCACACCACAGTCTCCAAAGGTGCTGAAGCACCTAGGAACAGCTTGGAATCAGAGGATGGTGATGGTCCTGTTTCATCTCTCTCATCAAAAGAAGATTTTAAAATTCCTAAGAATATTATACAAATTAAGACAAGTGGAGGCACAAGAACAGGTGGTGGAAATTTGAATGACTTGTCTGCAGAAATCACCAGCTCACCAGGGACAAAGACACCAACTTTGGTGGCCCGGTTAATGGGTTTGGATCTTCTTCCAGGGACACACTCACCCTCCTTTTCTCCTTCTTCTTCATGTCTTTCCGCTCCCAACACACAAGGCAATGCGCCACATCTGCACCACCACCCTAGGCACAAGCAACATGTCCAAACCAAGCATAGAAACAGCATAGACAGCAGTGACATTGCAGCCACCAGATCTTTGCCTGAGACACCAAGAATCTCCTCAGCAAGAAGATCAGATGTTGATTACCACCACAGATTCTCACTCCAGATCAACAAGGAAAACATGAATCTTGGTGAGGATTTGGAGCTCCCTAGGCTCTCGTTTTCCAAAAGGAAGTGTGATGAGAACAATGGCAGGAGTCCAAGCAACTATGCCAGACAAATAGTCAAACAGGTTAAGGAAAGTGTGGGCAGAAAAGTTGGCCAAGACATCACTAACACTCTGAAAACAAGAGAAGAAATTCTAGGCCAACCCAAAAGCAAAAAATCTTCCAAAACATCATCATTGAAAGCAATTGATGAAACTGAAACTAGCCCACTGAAAGCACACTCAAACACATCTTCCTATTCCCCAAGGCTTAGATTCCTTGACAAGCACAAGCCAACCACACCATCGCCACTCACCCCAAAAGACCAAAACATGCTGAAACTACCACCACCTCCTCCTCCGGTTAACACTCAGCTTCCAAGAGTTTTAACAAAACCAAAGCCTCAAGCATTTTCGTTGCAAGAGCAGAAAGATTTTCATCAGAACAACACATCTGTCCCAAAATGCAAAAGGGCTACCAATGAAAAGTTCAACTCAAGGCTCAAAAGGCCTCCACAGACATCGGACATAATAAGAAACAAGCAAGAAGAATCATTCATCATTCGCCCCACATCGCCTACTAGAGCCAGTGACACCAAAACCACTAAAAGCAAGAAAACTCATCCATTGTCAAGTAATCTCCTCAACAACATCAACACTGTACCAAATCTTCTTCCTGTCAAGACAGACCCTTCTCCTCCAGCAACCAAAATTCCTCCAAAACAGTCACAGGTGTGTGATAGTCAAGAGTCCAAAAGCAGCTCACAGTTATCTAGTTCTTCGCGCCAGAGGTACAAACAAGAAGGAACAACCACACTCGCCACCCGAGAAACATCACAGAACAAACCTAACAGTGCTTCCGCCACCATTGGAGCACCCCAACCTCACTCTCACACCCCACAAGAGCTTCACTACATCACAGCTATCCTAGCCCGTACAACTGCCCTAAACGTAGAGGGCACCCCCACAAACCCCACACTACTGCCCCTTCACCACCACTGGTTCTCCCCAACTCACCCACTTGACCCATCAATCTTCCTCCACCTCGAACACCTTGCCGCCAACAAAGATCTTAGCTTTCCCCCAAAAGAACAACTGGGTCACCGTTGGAACAGGAAGTTACTGTTTGATCTGGTGGACGAGGTTCTGAAGGAGATTCTGCAAGAGAGTGGGAAAAAGAGACTTTGGTTTCCACATGGTGTTGCTGGTTGTTGGCACAATGGAAGCGTTGTGGAGAGGGTGTGGAAGAGGGTGGGGGAGTTCCCACGTGCGAAATGTGAGGTGTTGGAGGACATTGATGGATTGATTGAGGGAGAGGACATGGAGAGAGAGAAGAATGGTGAAAGGTTGGAGGAAGAAGGAGAAGGGTTGGTGGCAGAGATTGAAGGGAACATATGGGACACGTTAGTGCATGAAACGGTTATGCTTATAGATTGCTTGGGAAATGTGAGAAAAGATAAGTTCTTAGATGATGTGAAAATTTCACATGTTTGTACTGTCTCTCAATTTTAA 2238 0.4562 MGKEGYFAGRTSKRGVVVGRGGGDAETQVPSGCMCAVFQFFDFHPFHFPNINQQQTSFKPPSCTLEDHTTVSKGAEAPRNSLESEDGDGPVSSLSSKEDFKIPKNIIQIKTSGGTRTGGGNLNDLSAEITSSPGTKTPTLVARLMGLDLLPGTHSPSFSPSSSCLSAPNTQGNAPHLHHHPRHKQHVQTKHRNSIDSSDIAATRSLPETPRISSARRSDVDYHHRFSLQINKENMNLGEDLELPRLSFSKRKCDENNGRSPSNYARQIVKQVKESVGRKVGQDITNTLKTREEILGQPKSKKSSKTSSLKAIDETETSPLKAHSNTSSYSPRLRFLDKHKPTTPSPLTPKDQNMLKLPPPPPPVNTQLPRVLTKPKPQAFSLQEQKDFHQNNTSVPKCKRATNEKFNSRLKRPPQTSDIIRNKQEESFIIRPTSPTRASDTKTTKSKKTHPLSSNLLNNINTVPNLLPVKTDPSPPATKIPPKQSQVCDSQESKSSSQLSSSSRQRYKQEGTTTLATRETSQNKPNSASATIGAPQPHSHTPQELHYITAILARTTALNVEGTPTNPTLLPLHHHWFSPTHPLDPSIFLHLEHLAANKDLSFPPKEQLGHRWNRKLLFDLVDEVLKEILQESGKKRLWFPHGVAGCWHNGSVVERVWKRVGEFPRAKCEVLEDIDGLIEGEDMEREKNGERLEEEGEGLVAEIEGNIWDTLVHETVMLIDCLGNVRKDKFLDDVKISHVCTVSQF* 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1304 745 Pfam DUF761-associated sequence motif 126 155 IPR032795 -
Pvu4g1304 745 PANTHER LOW PROTEIN: M-PHASE INDUCER PHOSPHATASE-LIKE PROTEIN 1 718 - -
Pvu4g1304 745 MobiDBLite consensus disorder prediction 408 440 - -
Pvu4g1304 745 MobiDBLite consensus disorder prediction 481 538 - -
Pvu4g1304 745 MobiDBLite consensus disorder prediction 153 219 - -
Pvu4g1304 745 MobiDBLite consensus disorder prediction 448 468 - -
Pvu4g1304 745 MobiDBLite consensus disorder prediction 289 366 - -
Pvu4g1304 745 MobiDBLite consensus disorder prediction 300 332 - -
Pvu4g1304 745 MobiDBLite consensus disorder prediction 194 212 - -
Pvu4g1304 745 PANTHER DUF4378 DOMAIN PROTEIN 1 718 - -
Pvu4g1304 745 MobiDBLite consensus disorder prediction 58 96 - -
Pvu4g1304 745 MobiDBLite consensus disorder prediction 154 173 - -
Pvu4g1304 745 Pfam Domain of unknown function (DUF4378) 544 714 IPR025486 -
Pvu4g1304 745 MobiDBLite consensus disorder prediction 58 77 - -
Pvu4g1304 745 MobiDBLite consensus disorder prediction 401 541 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1304 Pvu-Chr4 39520211 39523564 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g1304 107 715 TRM (TON1 Recruiting Motif) Superfamily AT5G62170 34.810 4.61e-61 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1304 - - gmx:100795947 984.556
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g1304 4 39520211 39523564 Pvu4g1304 4 39520211 39523564 ECH
Pvu4g1304 4 39520211 39523564 Pvu7g0669 7 5799272 5802930 PCT