Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1303 ATGGCACTTTTGCCATATTCAAAATGCATTTTTCTTTATGTAATCATTTTTCTCTTCTTCACATTATCATCAATGTCTCAAGCAGAGCTTGATGCTCATTACTATGATAAAACATGTCCACAAGCAGAGAAAATCATTTCAGACACTGTTCTCAGTGCTTCCAAATTTGACCCAAAAGTCCCAGCTCGGATCTTGAGGATGTTCTTCCATGACTGTTTCATAAGGGGTTGTGATGCATCAATATTGCTGGACTCAACTCCCAAAAACCTGGCTGAGAAAGATGCTCCACCAAATCTCTCTGTTCATTCATTCTATGTTATTGATGAAGCCAAGACCAAGCTTGAGAAAGCTTGTCCACACACTGTTTCTTGTGCTGATATAATCTCCATTGCTGCTAGAGATGTGGTAGCACTGTCTGGAGGACCATCTTGGAGTGTGCTAAAGGGAAGAAAAGATGGAAGGGTGTCCAAGGCATCAGAAACAGTCAACTTGCCTGCTCCAACCTTAAATGTGAGCCAACTCATTCAGAGTTTTGCAAAGAGAGGTTTAGGGGTCAAAGATATGGTGACTCTCTCTGGTGGCCACACCCTTGGCTTCTCACACTGTTCTTCGTTCCAAGCTAGAGTTCATAACTTCAGTTTGTTACATGACATTGACCCCAGTTTGAACACTGAGTTTGCACTAGACCTAAAAGGAAAGTGTCCAAAACTAAACACCAACCCCAGTGCTGGACACTTCCTGGACTCAACATCATCAGTGTTTGACAATGATTACTACAGACAGTTGCTGGTGGGAAAGGGTTTGTTCTCATCAGATCAGTCACTTGTTGGGGATCAAAGAACTAGGTGGATTGTGGAAGCATTTGCCAAAGATCAGGGCTTGTTCTTCACAGAGTTTGTGGCTTCAATGTTGAAGCTTGGTAATGTGGGGGTCTCTCAAAATGGGGAAGTGAGACTTAATTGCAAGGTTGTGAATTGA 978 0.4254 MALLPYSKCIFLYVIIFLFFTLSSMSQAELDAHYYDKTCPQAEKIISDTVLSASKFDPKVPARILRMFFHDCFIRGCDASILLDSTPKNLAEKDAPPNLSVHSFYVIDEAKTKLEKACPHTVSCADIISIAARDVVALSGGPSWSVLKGRKDGRVSKASETVNLPAPTLNVSQLIQSFAKRGLGVKDMVTLSGGHTLGFSHCSSFQARVHNFSLLHDIDPSLNTEFALDLKGKCPKLNTNPSAGHFLDSTSSVFDNDYYRQLLVGKGLFSSDQSLVGDQRTRWIVEAFAKDQGLFFTEFVASMLKLGNVGVSQNGEVRLNCKVVN* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1303 325 PANTHER PEROXIDASE 66 11 324 - -
Pvu4g1303 325 ProSiteProfiles Plant heme peroxidase family profile. 29 325 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu4g1303 325 CDD secretory_peroxidase 29 324 IPR033905 GO:0004601|GO:0042744
Pvu4g1303 325 PRINTS Plant peroxidase signature 39 58 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu4g1303 325 PRINTS Plant peroxidase signature 63 83 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu4g1303 325 PRINTS Plant peroxidase signature 102 115 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu4g1303 325 PRINTS Plant peroxidase signature 121 131 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu4g1303 325 PRINTS Plant peroxidase signature 140 155 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu4g1303 325 PRINTS Plant peroxidase signature 186 198 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu4g1303 325 PRINTS Plant peroxidase signature 245 260 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu4g1303 325 PRINTS Plant peroxidase signature 261 278 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu4g1303 325 PRINTS Plant peroxidase signature 301 314 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu4g1303 325 Pfam Peroxidase 53 291 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu4g1303 325 Gene3D - 33 325 - -
Pvu4g1303 325 PANTHER PEROXIDASE 25-RELATED 11 324 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu4g1303 325 SUPERFAMILY Heme-dependent peroxidases 30 325 IPR010255 GO:0004601|GO:0006979|GO:0020037
Pvu4g1303 325 ProSitePatterns Peroxidases proximal heme-ligand signature. 187 197 IPR019793 -
Pvu4g1303 325 Gene3D Peroxidase, domain 2 165 306 - -
Pvu4g1303 325 PRINTS Haem peroxidase superfamily signature 61 75 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu4g1303 325 PRINTS Haem peroxidase superfamily signature 122 139 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu4g1303 325 PRINTS Haem peroxidase superfamily signature 140 152 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu4g1303 325 PRINTS Haem peroxidase superfamily signature 187 202 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu4g1303 325 PRINTS Haem peroxidase superfamily signature 247 262 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1303 Pvu-Chr4 39499425 39502255 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g1303 4 325 Peroxidase AT5G51890 68.421 1.21e-167 467
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1303 K00430 - gmx:100795422 585.874
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g1303 4 39499425 39502255 Pvu7g0673 7 5858793 5860428 PCT