Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1274 ATGTTCCAAACTGGTCCATTTAAGTGTTCTCTTCCTTCTCATTCTCTTCAACCACTTTCCTTCCACACTCTTATCTTCTTCTCTCTCTTTCTCTCATTTCTTCTCAATGCATTGAATTCCCTCATGGGCTTTCTCCGGCGACTCTTCGGCGCCAAGAAACACAATCCGCCACCCTCCGACGGCGCACCTCCCAAACCCGTCAAGGACAAGAAAACGTGGAACTTCGTAAAGCAGAGTACGAGGTACAAGTCCACCACGTTGCTCTCACTTAACAAAAACAATTTTGACCCTTCCACTTCCTCTGCTCCTTTCTCCGACTCCTTGGACGCCAACAAGCATGCCATCGCCGTCGCGGCGGCTACCGCCGCCGTCGCAGAGGCCGCTCTCGCCGCCGCCCACGCAGCAGCCGAGGTCGTGAGGCTGACCAGCGGCAATGGGCCTGCCGCCGGAAGACCCACCACGGCGTCTCATCCCCGGCAGACGGCTGAGGATACCTCCGCCGCCGTGAGGATTCAGTCGGCGTTCCGAGGATACTTGGCAAGGAGGGCTTTGAGAGCACTTAAAGCATTGGTGAAGTTGCAAGCATTGGTGAGAGGCCACATTGTGAGAAAGCAAACTACAGATATGCTCAGGCGCATGCAGACTTTGGTGCGACTGCAGTCTCGGGCGCGTGCCACACGTGGGAACTTGTCTGATAATATGCATTCTTTCAAGTCTTCACTTTCTCATTACCCTGTGCCTGAAGATTATCAGCACTCACTTTATGGCTATAGTACAAAATTTGATGGATCTATTCTCAAGAGATGTAGTTCCAACGCAAATTTTAGAGACGTTGACTTGGAGAAAGCCCGGTTTGGTTCCCATTGGCTAGACAATTGGATGGAAGAAAATTCTTGGAGCCAAACTAGAGATGGTTCATTGAAAAATGGGCACCTTGATGATGAGAAGAGTGACAAGATTCTTGAAGTGGATACTTGGAAGCCACATTTGAACTCACACCATAGTAGTGGCAGCTCATTTCAGCCAGCACATCATTATTTGTCTTCTGATTACAACAATGAGAATTTTGTGGCATATGAGTCACCGTCGAAACGTTCTTCAAAAACTCTTTATCCAAGTCTCTCTTCGAGGGAGGCTCTACCCTTTGGCTCTCTGAAACTTCACAAAGGAAAAGAAGAAGCATCTTTGAGAAATGTTGAGGATAGTCCTCAAGCATTCTCTGCTTCCTCTGGACTTGGAAGTGGTGCAAGGAGAGGTCCATTCACACCAACTAAGAGTGAGTGTGCATGGAGTGTCTTCAGTGGCTATTCTGGTCATCCCAATTACATGTCAAATACTGAATCTTCAAGAGCCAAGGTTAGATCACATAGTGCTCCAAGGCAAAGAATTGAGTTTGAGAGATACGGTTCCTCAAGAAGGTCTCTTCAGGGTTATTATGATGCAGGACCTAGTTCAGACAGGGATTCTGATTTTAGAAGCAAGGCCTATTCTACCACAAACAGCAGCTTGAACAGAATTGGGAGTACCAATTTAAGGTGA 1539 0.4795 MFQTGPFKCSLPSHSLQPLSFHTLIFFSLFLSFLLNALNSLMGFLRRLFGAKKHNPPPSDGAPPKPVKDKKTWNFVKQSTRYKSTTLLSLNKNNFDPSTSSAPFSDSLDANKHAIAVAAATAAVAEAALAAAHAAAEVVRLTSGNGPAAGRPTTASHPRQTAEDTSAAVRIQSAFRGYLARRALRALKALVKLQALVRGHIVRKQTTDMLRRMQTLVRLQSRARATRGNLSDNMHSFKSSLSHYPVPEDYQHSLYGYSTKFDGSILKRCSSNANFRDVDLEKARFGSHWLDNWMEENSWSQTRDGSLKNGHLDDEKSDKILEVDTWKPHLNSHHSSGSSFQPAHHYLSSDYNNENFVAYESPSKRSSKTLYPSLSSREALPFGSLKLHKGKEEASLRNVEDSPQAFSASSGLGSGARRGPFTPTKSECAWSVFSGYSGHPNYMSNTESSRAKVRSHSAPRQRIEFERYGSSRRSLQGYYDAGPSSDRDSDFRSKAYSTTNSSLNRIGSTNLR* 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1274 512 MobiDBLite consensus disorder prediction 474 512 - -
Pvu4g1274 512 Pfam Protein of unknown function (DUF4005) 402 486 IPR025064 -
Pvu4g1274 512 SMART iq_5 186 207 IPR000048 GO:0005515
Pvu4g1274 512 SMART iq_5 163 185 IPR000048 GO:0005515
Pvu4g1274 512 MobiDBLite consensus disorder prediction 143 164 - -
Pvu4g1274 512 ProSiteProfiles IQ motif profile. 188 215 IPR000048 GO:0005515
Pvu4g1274 512 ProSiteProfiles IQ motif profile. 164 192 IPR000048 GO:0005515
Pvu4g1274 512 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 165 209 IPR027417 -
Pvu4g1274 512 PANTHER IQ-DOMAIN 5-RELATED 42 510 - -
Pvu4g1274 512 Pfam IQ calmodulin-binding motif 165 185 IPR000048 GO:0005515
Pvu4g1274 512 Pfam IQ calmodulin-binding motif 188 205 IPR000048 GO:0005515
Pvu4g1274 512 MobiDBLite consensus disorder prediction 147 164 - -
Pvu4g1274 512 Gene3D - 163 215 - -
Pvu4g1274 512 PANTHER CALMODULIN-BINDING PROTEIN 42 510 - -
Pvu4g1274 512 MobiDBLite consensus disorder prediction 494 512 - -
Pvu4g1274 512 MobiDBLite consensus disorder prediction 393 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1274 Pvu-Chr4 38942943 38947629 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g1274 42 479 IQD Protein Family AT5G62070 46.137 1.71e-62 207
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g1274 4 38942943 38947629 Pvu4g1274 4 38942943 38947629 ECH
Pvu4g1274 4 38942943 38947629 Pvu7g0686 7 6008351 6013124 PCT