Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1261 AATCTCCACCAACTTGGCGCCCTCACTCATCGCAATCTCCAATCCTTTGCTCAAACCTATGGCCCTTTAATGTTACTTCACTTTGGAAGGGTGCCAGTTCTTGTGGTTTCCACAGCTGAGGCAGCTCGTGAGGTTATGAAAACACACGACCTTGTTTTTTCAAACAGACCACATCGTAAGATGTTTGATATCTTCTTGTATGATTACAAAGATGTGGCATCTGCTCCATATGGCAACTACTGGAGACAGATAAGGAGTATTTCTGTCTTGCATCTTCTCAGTGCAAAAAAGGTTCAGTCCTTTGGTGTAGTGAGAGAAGAGGAAATCTCCACAATGATGGATAAGATTAAGCAGTGTTGTTCTTCTTCGATGCCTGTGAATTTAACTGATTTATTTACTACAGTCGCAAATGACATAGTGTGTAGAGCTGCTCTCGGAAGGAGATACAGTGGAGAAGGAGGGAGTAAGCTTCGGGAGCCAATGGATGAGATGATGGAGCTGTTGGGTGCTTCAGTTATAGGGGACTACATACCTTGGCTTGATTGGTTGGGAAGCGTTAATGGAATGTATGGTAGGGCAAAGAGACAGAATGATTTGGTGGACATTTTGCTGAGGATCCAAGAGACAAACTCCTTGGGATTCCACATTGATAAAAGAACCATAAAGGCTTTAATCCTGGATATGTTTGCTGCAGGCACTGAGACTAGCTCCACAATCCTAGGATGGATAATGACAGAACTCCTAATGTACCCAACTGTGATGCAGAAGCTAAAAGGTGAGATAAGGAATGCGGTTAGTGGCAGAACTCGCATAACTGAGGAAGATTTAACTAGCATGCATTATTTGAAGGCAGTGATTAAAGAAACTTTTCGATTACATCCCCCAGTTCCCTTGTTGTTTCCAAGGGAATCCATGGAAGATGCCAAAGTGATGGACTATGACATTGCAACTGGCACACAAGTAATAGTTAATGCTTGGGCAATTGCAAGAGATCCTTCTTATTGGGACAAACCTGAACAGTTTGAACCAGAGAGATTCTTAAATAGTTCAATAGATGTGAAAGGACATGATTTTGAAGTGATACCATTTGGAGCAGGAAGGAGGGGTTGTCCAGGAATAATGTTTGCCATGAATGTGATTGAGCTGGTCTAG 1152 0.4253 NLHQLGALTHRNLQSFAQTYGPLMLLHFGRVPVLVVSTAEAAREVMKTHDLVFSNRPHRKMFDIFLYDYKDVASAPYGNYWRQIRSISVLHLLSAKKVQSFGVVREEEISTMMDKIKQCCSSSMPVNLTDLFTTVANDIVCRAALGRRYSGEGGSKLREPMDEMMELLGASVIGDYIPWLDWLGSVNGMYGRAKRQNDLVDILLRIQETNSLGFHIDKRTIKALILDMFAAGTETSSTILGWIMTELLMYPTVMQKLKGEIRNAVSGRTRITEEDLTSMHYLKAVIKETFRLHPPVPLLFPRESMEDAKVMDYDIATGTQVIVNAWAIARDPSYWDKPEQFEPERFLNSSIDVKGHDFEVIPFGAGRRGCPGIMFAMNVIELV* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1261 383 PRINTS E-class P450 group I signature 17 36 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu4g1261 383 PRINTS E-class P450 group I signature 41 62 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu4g1261 383 PRINTS E-class P450 group I signature 220 237 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu4g1261 383 PRINTS E-class P450 group I signature 240 266 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu4g1261 383 PRINTS E-class P450 group I signature 283 301 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu4g1261 383 PRINTS E-class P450 group I signature 324 348 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu4g1261 383 PRINTS E-class P450 group I signature 360 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu4g1261 383 PRINTS E-class P450 group I signature 370 383 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu4g1261 383 PANTHER CYTOCHROME P450 71B11-RELATED 1 195 - -
Pvu4g1261 383 PANTHER CYTOCHROME P450 71B11-RELATED 194 383 - -
Pvu4g1261 383 Pfam Cytochrome P450 2 184 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu4g1261 383 Pfam Cytochrome P450 193 382 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu4g1261 383 PANTHER CYTOCHROME P450 FAMILY PROTEIN 194 383 - -
Pvu4g1261 383 PANTHER CYTOCHROME P450 FAMILY PROTEIN 1 195 - -
Pvu4g1261 383 Gene3D Cytochrome P450 1 383 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu4g1261 383 PRINTS P450 superfamily signature 231 248 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu4g1261 383 PRINTS P450 superfamily signature 284 295 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu4g1261 383 PRINTS P450 superfamily signature 361 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu4g1261 383 PRINTS P450 superfamily signature 370 381 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu4g1261 383 SUPERFAMILY Cytochrome P450 1 382 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu4g1261 383 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 363 372 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1261 Pvu-Chr4 38636544 38638192 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g1261 1 383 Cytochrome P450 AT3G48270 48.768 2.31e-144 417
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1261 - - pvu:PHAVU_004G118900g 771.155