Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1260 ATGTTCACTTCTCTGCATGAAAACTCTTCATGCTGGTTTTTCCTCCCAATCGCTACCTTAATCATCTTCTTTTTACCTACTCTCATCAATCTTTTATCCAAATGTAATCACAATTTCAATTCTGCAAGGAGCAAAAAAATCTCACCACCATCTCCTCCAAAGCTTCCAATAATAGGAAATCTCCACCAACTTGGCGCCCTCACTCATCGCAATCTCCAATCCTTTGCTCAAACCTATGGCCCTTTAATGTTACTTCACTTTGGAAGGGTGCCAGTTCTTGTGGTTTCCACAGCTGAGGCAGCTCGTGAGGTTATGAAAACACACGACCTTGTTTTTTCCAACAGACCACATCGTAAGATGTTCGATATCTTGTTGTATGATTCCAAAGATGTGGCAACTGCTCCATATGGCAACTACTGGAGGCAGATAAGGAGTATTTCTGTCTTGCATCTTCTCAGTGCAAAAAAGGTTCAATCCTTTGGTGTAGTGAGAGAAGAGGAAATCTCCGCAATGATGGATAAGATTAAGCAGTGTTGTTCTTCTTCGATGCCTGTGAATTTAACTGATTTATTTACTACAGTCGCAAATGACATAGTGTGTAGAGCTGCTCTCGGAAGGAGATACAGTGGAGAAGGAGGGAGTAAGCTTCGGGAGCCAATGGATGAGATGATGGAGCTGTTGGGTGCTTCAGTTATAGGGGACTACATACCTTGGCTTGATTGGTTGGGAAGCGTTAATGGAATGTATGGTAGGGCAAAGAGAGTGGCTAAACAGCTTGATGAATTTTTTGATCAAGTTCTTGATGAGCATGTTAGTAGGAGAGGCCATGATGTGCATGGTGCTGATAATGAAGAGAAGAATGATTTGGTGGACATTTTGTTGAGGATCCAAGAGACAAACTCCTTGGGATTCCAGATTGATAAAAGAACCATAAAGGCTTTAATCCTGGATATGTTTTCTGCAGGCACTGAGACTAGCTCCACAATCCTAGGATGGATAATGACAGAACTCCTAAGGCACCCAACTGTGATGCAGAAGCTAAAAGGTGAGATAAGGAATGTGGTTAGTGGCAGAAGTCGCATAACTGAGGAAGATTTAACTAGTATGCATTATATGAAGGCAGTGATTAAAGAAACTTTTCGATTATATCCCCCAGCTCCCTTGTTGCTTCCAAGGGAATCCATGGAAGATGCCAAAGTGATGGACTATGACATTTCAACTGGCACACAAGTAATAGTTAATGCTTGGGCAATTGCAAGAGATCCTTCTTACTGGGATAAACCTGAACAATTTGAGCCAGAGAGATTCTTAAATAGTTCAATAGATGTGAAAGGACATGATTTTGAAGTGATACCATTTGGAGCAGGGAGGAGGGGTTGTCCAGGAATAATGTTTGCCATGAATGTGATTGAGCTGGTCCTAGCAAACCTTGTTCTCCAATTTAATTGGGAAGTTCCAAGCGGAGAAGTGGGGCAACAGACATTGAACATGACTGAAACTAATGGCTTGACCAGTCATAGAAAATTTCCTCTCATAGCAATTGCATCCTATGATGCCTAA 1560 0.4179 MFTSLHENSSCWFFLPIATLIIFFLPTLINLLSKCNHNFNSARSKKISPPSPPKLPIIGNLHQLGALTHRNLQSFAQTYGPLMLLHFGRVPVLVVSTAEAAREVMKTHDLVFSNRPHRKMFDILLYDSKDVATAPYGNYWRQIRSISVLHLLSAKKVQSFGVVREEEISAMMDKIKQCCSSSMPVNLTDLFTTVANDIVCRAALGRRYSGEGGSKLREPMDEMMELLGASVIGDYIPWLDWLGSVNGMYGRAKRVAKQLDEFFDQVLDEHVSRRGHDVHGADNEEKNDLVDILLRIQETNSLGFQIDKRTIKALILDMFSAGTETSSTILGWIMTELLRHPTVMQKLKGEIRNVVSGRSRITEEDLTSMHYMKAVIKETFRLYPPAPLLLPRESMEDAKVMDYDISTGTQVIVNAWAIARDPSYWDKPEQFEPERFLNSSIDVKGHDFEVIPFGAGRRGCPGIMFAMNVIELVLANLVLQFNWEVPSGEVGQQTLNMTETNGLTSHRKFPLIAIASYDA* 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1260 519 SUPERFAMILY Cytochrome P450 49 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu4g1260 519 Pfam Cytochrome P450 49 495 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu4g1260 519 Gene3D Cytochrome P450 35 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu4g1260 519 PRINTS P450 superfamily signature 321 338 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu4g1260 519 PRINTS P450 superfamily signature 374 385 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu4g1260 519 PRINTS P450 superfamily signature 451 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu4g1260 519 PANTHER CYTOCHROME P450 FAMILY PROTEIN 29 517 - -
Pvu4g1260 519 PANTHER CYTOCHROME P450 71B11-RELATED 29 517 - -
Pvu4g1260 519 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 453 462 IPR017972 GO:0005506|GO:0016705
Pvu4g1260 519 PRINTS E-class P450 group I signature 76 95 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu4g1260 519 PRINTS E-class P450 group I signature 100 121 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu4g1260 519 PRINTS E-class P450 group I signature 194 212 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu4g1260 519 PRINTS E-class P450 group I signature 310 327 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu4g1260 519 PRINTS E-class P450 group I signature 330 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu4g1260 519 PRINTS E-class P450 group I signature 373 391 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu4g1260 519 PRINTS E-class P450 group I signature 414 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu4g1260 519 PRINTS E-class P450 group I signature 450 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu4g1260 519 PRINTS E-class P450 group I signature 460 483 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1260 Pvu-Chr4 38608920 38611541 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g1260 20 516 Cytochrome P450 AT3G48270 48.697 4.09e-175 501
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1260 - - gmx:100810154 800.045