Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1213 ATGGAGATCTTGCTTTTACCTGGAACACTTGCTTGCTTTGCAATTTTACCTCTTCTTTTGCTCTTCAAACTAACGTTTTCTTGGTGGATTTCTCCCATCCAAACTCATCTTAAGCTCAAAAGATCTGGATTTGGAGGGCCACCCCCAACTTTTCCTCTTGGGAACATTCGAGAGATGAAAAACAACAATAGTCTTAGCTCTTCACTACTTTCCTCTAACCTCACCCACGATATTCACTCCACTGTCTTCCCCTACTTTTCTCGCTGGCAAAACTCTCACGGGAAGGTGTTTATCTACTGGTTGGGCACAGAACCGTTTTTGTACATTGCTGATCCAGAATTTCTGAAAAAAATGTCCACTGAGGTTTTGGCCAAGAAATGGGGAAAACCTAGAGTGTTTAGACATGATAGAGACCCTTTGTTTGGAAATGGTTTGATTATGGTTGAAGGGAATGAATGGGTTCGTCACCGACATGTTATAGCACCAGCATTTTCTCCTCTTAACCTCAAGGCAATGGCAAGCATGATGAGTGAGTCTACAAATCAAATGATAGAAAGGTGGATTGCACAAATAAACTCAGGTAATCCAGAAATCGATGTGGAAAAGGAGGTTGTAGAAACTGCAGGAGAAATCATTGCAAAAACAAGCTTTGGCATGAAGGGAAAAAATGCAAAGGAAGTGTCTGAAAAGCTGCGTGCCCTACAAATGGAACTTTTCAGTACAACAAGATATGTAGGGGTCCCATTTGAGAAGTGTTTGAACGTCAAGAAAACCTTAAAGGCCAGGAAACTTGGGAAAGAGATTGATAAACTTTTGCTATCTGTCATAACATCTCGCATGAAATCAGTGAAAAGACAAACTCAAGAAGACCTATTGGGGTTGCTGTTGCAAGGAAACCATCAAGGTGATGGGAAGTTAGGGAAGACATTCACCACTAGAGATTTGTTGGATGAGTGCAAGACTTTCTTCTTTGCTGGCCATGAGACAACAGCATTGGCTATCTCGTGGACCTTGTTGCTTCTTGCTATGCATCAAGATTGGCAAATCCAGTTAAGAGATGAGATCAGAGAAGTGGTCGGTGATAAAGAACTTGATATCAACGTGCTTGCCGGCTTGAAAAAGATGAAGTGGGTGATGAATGAAGTTCTAAGACTCTACCCAACGGCACCAAATGTGCAAAGGCAAGCAAGAGAAGACATTCAAGTTGATAATTTAAAGGTGCCTAATGGAACCAACATGTGGATTGATGTTGTGGCAATGCACCATGATCAAGCATTGTGGGGAAAAGATGTGAATGAGTTTAAACCAGAGAGGTTCATGAATGATGTCAATGGTGGATGTAACCACAAAATGGGGTACTTGCCTTTTGGATTTGGAGGGAGGACATGTGTTGGAAGAAACTTGAGCTTCATGGAGTATAAGATAGTGCTAACCCTACTTCTCTCTAGATTTAGCTTTAAAGTTTCCCCAAGTTATAACCATTCACCCTCTATCATGCTCTCCCTTAGGCCAACTCATGGACTTCATCTCTTAGTTCAACCCCTTTATTAA 1551 0.4152 MEILLLPGTLACFAILPLLLLFKLTFSWWISPIQTHLKLKRSGFGGPPPTFPLGNIREMKNNNSLSSSLLSSNLTHDIHSTVFPYFSRWQNSHGKVFIYWLGTEPFLYIADPEFLKKMSTEVLAKKWGKPRVFRHDRDPLFGNGLIMVEGNEWVRHRHVIAPAFSPLNLKAMASMMSESTNQMIERWIAQINSGNPEIDVEKEVVETAGEIIAKTSFGMKGKNAKEVSEKLRALQMELFSTTRYVGVPFEKCLNVKKTLKARKLGKEIDKLLLSVITSRMKSVKRQTQEDLLGLLLQGNHQGDGKLGKTFTTRDLLDECKTFFFAGHETTALAISWTLLLLAMHQDWQIQLRDEIREVVGDKELDINVLAGLKKMKWVMNEVLRLYPTAPNVQRQAREDIQVDNLKVPNGTNMWIDVVAMHHDQALWGKDVNEFKPERFMNDVNGGCNHKMGYLPFGFGGRTCVGRNLSFMEYKIVLTLLLSRFSFKVSPSYNHSPSIMLSLRPTHGLHLLVQPLY* 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1213 516 Pfam Cytochrome P450 81 498 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu4g1213 516 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 456 465 IPR017972 GO:0005506|GO:0016705
Pvu4g1213 516 Gene3D Cytochrome P450 30 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu4g1213 516 PANTHER CYTOCHROME P450 FAMILY 72 PROTEIN 12 510 - -
Pvu4g1213 516 SUPERFAMILY Cytochrome P450 76 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu4g1213 516 PANTHER CYTOCHROME P450 FAMILY MEMBER 12 510 - -
Pvu4g1213 516 PRINTS P450 superfamily signature 325 342 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu4g1213 516 PRINTS P450 superfamily signature 377 388 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu4g1213 516 PRINTS P450 superfamily signature 454 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu4g1213 516 PRINTS P450 superfamily signature 463 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu4g1213 516 PRINTS E-class P450 group I signature 90 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu4g1213 516 PRINTS E-class P450 group I signature 314 331 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu4g1213 516 PRINTS E-class P450 group I signature 334 360 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu4g1213 516 PRINTS E-class P450 group I signature 376 394 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu4g1213 516 PRINTS E-class P450 group I signature 417 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu4g1213 516 PRINTS E-class P450 group I signature 453 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu4g1213 516 PRINTS E-class P450 group I signature 463 486 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1213 Pvu-Chr4 37500922 37504514 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g1213 12 515 Cytochrome P450 AT5G52400 58.755 0.0 649
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1213 - - gmx:100810679 926.006
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g1213 4 37500922 37504514 Pvu4g1213 4 37500922 37504514 ECH
Pvu4g1213 4 37500922 37504514 Pvu7g0730 7 6492628 6495088 PCT
Pvu7g0729 7 6462092 6464044 Pvu4g1213 4 37500922 37504514 PCT