Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1204 ATGCCAATTGCAAAACTTAAATCCTCTAGCACTCCAGATGTCATGGATGCAGAAGAGAAAATAGACACTATAATCAGACAGACTATTGGCAGAGAAACTTCCCTTTCTTTCCCAAGTGTCAATGACAACTCTATACATTGGATTGAATTATTCAATGCTTTAGATTCACAAGGTTGGCCTTTGCTTTATCCTATGAAGGTTCAGTTGCAGAATTGTGACAAGTGTTCTCGAGAGTTTTGCTCCCCCATTAACTATAGAAGGCATATTCGTGTACATCATCGTTTGAAAAAGCTTGATAAGGATTTTACAAAAACTAGGGATCTTTTAGGAGCATATTGGGATAAGCTCTCTGTAGAAGAGGCAAAGGAAGTTGTATCATTGGAAAATGTGGTGCTGGAGAAAGTTCCGGGTTCTTCAATTTTAAAATCATTGACAACTCTTCTTCAAAACCAAGGATTTTATGCATTTCCTCGGTATTATCTGATGGCTGGTGCTGCCCTTTTGGATATTGTTCAATCTAAATCTTCCAGCTTTCCTATATCTTCCGAAGAGTTGTTCAGCGTTCTTGATAATGCCAGTGAAAAAACATGTTTATGCGGAACAGCAGAATCAGTGAAAAGATATGTATTTGATGGAAATGCGGGAAAAATTGGTCTTGAACCAAAAAACCTAGTTGCTTGCACAAGTTTCTTGCTAGAACAAAAATTGGTGATGGCGTGGCTTACTGACAAGGATGCTGAAGCACTTAAGTGTCAAGAGCAATTGGTGGAGGAGGAAGAAGCTGCTCAGAAAAGACAAACTGAGATTTTGGAGAGGAAACGCCAGAAGAAGCTTAGACAAAAAGAACAGAAAGCTAGGGAACAAAGACACAAAGCTGAGGCAGAAATTGAAGGCGATATTGACAGTACTGTAAAGGCTTTATCACTGACAGAAGCATCTTCAGATACGTACAATTTTGAAGCTCGTAATCCAAATGTATTTTCAGATAACGTATCTTCACCTGTACTTCTCCAATATCTTGACACCAATGAGGAAATAAATGGGGATACTCATTCAGAGTATGATACCATCCCTGATCAAAATCTGGAGAGATGGTCTGCACATGGGCATATGGGCAAATGGGCTGAAGCTAATGATTTGCTTACAAATCAGATTTCTCCTCTGTCAAAACTTGAAGTCAATCAGAAATATGAAGCCAACCATGATAACAAGGCATCAGCTATTGTCAGTGGTAGTCAAGTATGGAGTCCAAAGTCTGAAGAAGAAATTGACAAGGTGGTTTTAAAAACCACAAAAGAGAAAGAACCGGACCAACTTAAGAATCAAGAAGTTTTGATAGGATCTATATCTGTTAATCTTGACGACGATTGCAGACAATCAGAGGGTAATATGTTGGCTTCTGAAAGGGACTCTATGGTTGAGAATGTGGGCAAGCAGAATAGTTCTCGGGATAAGCTAATGAAAACTGATCGTGTCACGAGTGGCAACAGTCTCTCAATAGTCAAGGTTTGGAGGCCAGTCAGCCGGCTTGAAACGGAAGATCAAGTTCCAGTTCAAAGCGGTGAGACAGATGATGATGATTCAGTTCATGGAAATGTTCGAAATTGGTCAGTTCCAAGTTGTTTAAGGGAGGGTAGTACAGATGGTGATGATATTGGCTTTGAAAAACATTTCTCTCATCCAGAGGGTAGAGCGTATCCTGGTAGCTTCCAGTTCTCCATCCAGGATGCAAAAGCTTTCCTTGCAAAAAGATGGGAAGAAGCTATTTCATCAGATCATGTCACATTGCATCTTACCTCTGACTCAGAATCTTCTGGGTCCCAAGAGACACAGGATTCTATAACAGAAGCGAGTCAATCTTACGATGAGGATAGACGCAACATTGTAGCAAATGCAGATAACAAATTGCCTGCAACCTCCAGAATTGCTAAACCCAAACGCAGATTGAAGAAGTCTGAAAAGGGAATCAAGATAAAGTATGTTCCCAAACAGAAGAGAAATAACTTATGTGATATATAG 2019 0.3982 MPIAKLKSSSTPDVMDAEEKIDTIIRQTIGRETSLSFPSVNDNSIHWIELFNALDSQGWPLLYPMKVQLQNCDKCSREFCSPINYRRHIRVHHRLKKLDKDFTKTRDLLGAYWDKLSVEEAKEVVSLENVVLEKVPGSSILKSLTTLLQNQGFYAFPRYYLMAGAALLDIVQSKSSSFPISSEELFSVLDNASEKTCLCGTAESVKRYVFDGNAGKIGLEPKNLVACTSFLLEQKLVMAWLTDKDAEALKCQEQLVEEEEAAQKRQTEILERKRQKKLRQKEQKAREQRHKAEAEIEGDIDSTVKALSLTEASSDTYNFEARNPNVFSDNVSSPVLLQYLDTNEEINGDTHSEYDTIPDQNLERWSAHGHMGKWAEANDLLTNQISPLSKLEVNQKYEANHDNKASAIVSGSQVWSPKSEEEIDKVVLKTTKEKEPDQLKNQEVLIGSISVNLDDDCRQSEGNMLASERDSMVENVGKQNSSRDKLMKTDRVTSGNSLSIVKVWRPVSRLETEDQVPVQSGETDDDDSVHGNVRNWSVPSCLREGSTDGDDIGFEKHFSHPEGRAYPGSFQFSIQDAKAFLAKRWEEAISSDHVTLHLTSDSESSGSQETQDSITEASQSYDEDRRNIVANADNKLPATSRIAKPKRRLKKSEKGIKIKYVPKQKRNNLCDI* 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1204 672 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 1 667 - -
Pvu4g1204 672 Coils Coil 256 297 - -
Pvu4g1204 672 MobiDBLite consensus disorder prediction 599 657 - -
Pvu4g1204 672 ProSiteProfiles Zinc finger C2H2 type domain profile. 70 97 IPR013087 -
Pvu4g1204 672 MobiDBLite consensus disorder prediction 277 296 - -
Pvu4g1204 672 ProSitePatterns Zinc finger C2H2 type domain signature. 72 93 IPR013087 -
Pvu4g1204 672 MobiDBLite consensus disorder prediction 599 617 - -
Pvu4g1204 672 MobiDBLite consensus disorder prediction 511 558 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1204 Pvu-Chr4 37273962 37281144 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g1204 16 665 C2H2 Transcription Factor Family AT4G25610 38.009 1.57e-125 382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Pvu4g1204 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1204 - - gmx:100809067 900.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g1204 4 37273962 37281144 Pvu4g1204 4 37273962 37281144 ECH
Pvu4g1204 4 37273962 37281144 Pvu7g0739 7 6606669 6612880 PCT