Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1190 ATGCCTACATGGTGGGGGAAATCATCATCAAAAGAAACCAAGAAGAAAGCAAATAAGGAAAGTTTTATCAATACATTTCACCGAAAATTTAAAATCCCATCTGAAAGTAAATCCAGCAGTAGATCTGGAGGATCTCATAGACAATGCAATGATTCAATTTCTGAGAAAGGGGCTCAGTCTCCTCTTGAATCAAGATCTCCTTCACCTTCCAAAGTGGCAAGGTGTCAAAGTTTTGCTGAAAGGCCTCATGCTCAGCCACTACCACTTCCTGTCCTGCACCCATCAAATATAAGCCGAGCAGATTCTGAAATTAGCATATCAGCTAAATCAAGACTTGAAAAAGGCTCCAAACCATCATTGTTTCCACTACCAAAACCAGCATGCATGCGTGGTAGGCTGAACCCTGCCGATTTGGATGGAGATCTGGTCACTGCGTCAGTCTCTAGTGAGAGCTCTGCTGACAGTGATGAGCCAGTGGACTCTCGCAATCGTAGTCCTTTGGCAACAGACTGTGAAAATGGGACTAGAACTGCTGCAGGAAGTCCTTCCAGCTCGATGCCCAAGGATCTATCATCTACTGTTTCCCAAATAAATTCAAGAGAAACCAAAAAACCGGCAAACATTCTGGGTAATCACATGTCTTCTACTTCACCAAAACGGAGGCCTTTAAGCAACCATGTTTCAAATTTGCAGATTCCTCCTCATGGTGCCTTCTGCAGTGCACCTGATAGTTCCAAATCAAGTCCATCAAGAAGTCCGTTGAGAGTATTTGGCACAGAAAAGGTGTTGAACTCTGCCTTTTGGGCTGGAAAGCCGTATTCGGAGATCAATTTAGGTGGATCTGGGCACTGCTCAAGTCCAGGTTCTGGTCACAATTCTGGACATAATTCAATGGGAGGGGACATGTCAGGACAGTTATTTTGGCAACCTAGCAGGGGTAGCCCCGAATATTCTCCTGTACCTAGTCCCAGAATGACTAGCCCTGGACCTAGCTCTAGAATTCAGAGTGGTGCTGTTACACCTATTCATCCTAGAGCTGGGGGAACACCCAATGAATCACAGACAGGACGGGTTGATGATGGAAAACAACAGAGTCATCGTTTGCCCCTTCCTCCTTTAGCAGTGACCAATACTTTACCTTTCTCTCATTCAAATTCTGCAGCAACTTCTCCATCCATGCCAAGAAGTCCAGGAAGAGCAGATAATCCAATAAGCCCTGGATCACGTTGGAAAAAAGGAAAACTGCTTGGCAGAGGCACATTTGGACATGTTTTTGTTGGCTTTAATAAGGAAAGTGGTGAAATGTGTGCTATGAAAGAGGTGACTCTGTTTTCAGATGATGCCAAATCTAAAGAAAGTGCTAAGCAATTAATGCAGGAAATTACCTTATTAAGTCGATTGCGGCATTCAAATATTGTGCAGTATTATGGTTCTGAAACAGTAGGTGACAAACTTTACATATATCTGGAGTATGTCGCTGGAGGCTCCATATATAAACTTCTTCAAGAGTATGGACAATTTGGTGAACTAGCTATTCGTAGTTTTACTCAACAAATTTTGTCAGGACTTGCTTATTTACATGCTAAAAATACTGTCCACAGGGACATCAAAGGAGCAAATATACTGGTAGATACTAATGGTCGGGTTAAGTTGGCAGACTTTGGCATGGCAAAGCATATAACAGGGCAATCATGTCCATTATCATTCAAGGGAAGCCCCTATTGGATGGCTCCTGAGGTTATCAAAAACTCCAATGGTTGCAACCTTGCTGTTGATATATGGAGCCTAGGATGCACAGTTTTGGAAATGGCCACAACTAAACCTCCTTGGAGTCAGTTTGAAGGGGTTGCTGCCATGTTCAAGATTGGTAATAGCAAGGAACTCCCAACAATCCCGGATCACCTATCTAGTGAGGGAAAGGATTTTGTTAGGAAATGCCTACAACGGAATCCACACAATCGCCCTTCTGCAAGTGAATTATTGGACCACCCTTTTGTGAAACATGCTGCACCTTTAGAAAGACCTATTCTGGGTCCTGATGCTTCTTCAGACCCAGCTGTATCTGGGATCACACAGGGAGCTACAGCTCTGGGTATTGGACAAGGAAGGAATCCCTCTACATTGGATTCAGATAGACTTTCCCGTCATTCTTCTAGGTTTTTGAAAACTAATCCTCATGCAAGTGAAATCCATATTCCGAGGAATATATCCTGTCCTGTCTCACCCATTGGAAGCCCACTTTTGAGGCCAAGATCTCCGCAGCATATGAATGGTAGAATGTCTCCCTCTCCTATATCCAGCCCTCGGACTGCTTCTGGTGCATCCACACCTCTCAACGGTGGTAGTGGTGCCATTCCATTTAGTAATCACTTGGTTTACATTCAAGAGGGTCTTGGAAACTTGCCAAAGTCCTCAAATGGTGTCTACATTATTGGCCCTAATCATCATGACTTGAACGTTGACATTTTTCGAGGAATGCAACAGACGTCTCACATTACATCAGAACCGGTTCCAAGTGAAAGTGATGTTCTGGGGAGGCAGTTTGCACGGTCTCCTCGTAGCGAGCCATATGATGTTCAATCAGTCTTGGCTGATCGAGTTTGTCGGCAGCTGCTGGGGGATAATGTGAAAATCAACCCATCCCTTGATCTAAATCCCAATTCTTTGCTCAGCTGGGCTAATGGGTTATGA 2691 0.4407 MPTWWGKSSSKETKKKANKESFINTFHRKFKIPSESKSSSRSGGSHRQCNDSISEKGAQSPLESRSPSPSKVARCQSFAERPHAQPLPLPVLHPSNISRADSEISISAKSRLEKGSKPSLFPLPKPACMRGRLNPADLDGDLVTASVSSESSADSDEPVDSRNRSPLATDCENGTRTAAGSPSSSMPKDLSSTVSQINSRETKKPANILGNHMSSTSPKRRPLSNHVSNLQIPPHGAFCSAPDSSKSSPSRSPLRVFGTEKVLNSAFWAGKPYSEINLGGSGHCSSPGSGHNSGHNSMGGDMSGQLFWQPSRGSPEYSPVPSPRMTSPGPSSRIQSGAVTPIHPRAGGTPNESQTGRVDDGKQQSHRLPLPPLAVTNTLPFSHSNSAATSPSMPRSPGRADNPISPGSRWKKGKLLGRGTFGHVFVGFNKESGEMCAMKEVTLFSDDAKSKESAKQLMQEITLLSRLRHSNIVQYYGSETVGDKLYIYLEYVAGGSIYKLLQEYGQFGELAIRSFTQQILSGLAYLHAKNTVHRDIKGANILVDTNGRVKLADFGMAKHITGQSCPLSFKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVLEMATTKPPWSQFEGVAAMFKIGNSKELPTIPDHLSSEGKDFVRKCLQRNPHNRPSASELLDHPFVKHAAPLERPILGPDASSDPAVSGITQGATALGIGQGRNPSTLDSDRLSRHSSRFLKTNPHASEIHIPRNISCPVSPIGSPLLRPRSPQHMNGRMSPSPISSPRTASGASTPLNGGSGAIPFSNHLVYIQEGLGNLPKSSNGVYIIGPNHHDLNVDIFRGMQQTSHITSEPVPSESDVLGRQFARSPRSEPYDVQSVLADRVCRQLLGDNVKINPSLDLNPNSLLSWANGL* 897
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1190 896 ProSitePatterns Protein kinases ATP-binding region signature. 416 439 IPR017441 GO:0005524
Pvu4g1190 896 SUPERFAMILY Protein kinase-like (PK-like) 408 667 IPR011009 -
Pvu4g1190 896 MobiDBLite consensus disorder prediction 166 231 - -
Pvu4g1190 896 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 813 - -
Pvu4g1190 896 CDD STKc_MEKK1_plant 409 666 - -
Pvu4g1190 896 SMART serkin_6 410 666 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu4g1190 896 Pfam Protein kinase domain 411 666 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu4g1190 896 MobiDBLite consensus disorder prediction 36 73 - -
Pvu4g1190 896 MobiDBLite consensus disorder prediction 284 312 - -
Pvu4g1190 896 MobiDBLite consensus disorder prediction 1 254 - -
Pvu4g1190 896 ProSiteProfiles Protein kinase domain profile. 410 666 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu4g1190 896 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE YODA 1 813 - -
Pvu4g1190 896 MobiDBLite consensus disorder prediction 9 35 - -
Pvu4g1190 896 MobiDBLite consensus disorder prediction 744 781 - -
Pvu4g1190 896 MobiDBLite consensus disorder prediction 377 396 - -
Pvu4g1190 896 MobiDBLite consensus disorder prediction 284 411 - -
Pvu4g1190 896 MobiDBLite consensus disorder prediction 756 781 - -
Pvu4g1190 896 Gene3D Transferase(Phosphotransferase) domain 1 408 680 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1190 Pvu-Chr4 36906152 36913729 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g1190 1 886 MAP Kinase Kinase Kinase AT1G63700 59.011 0.0 904
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Pvu4g1190 Pkinase 3.2e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1190 K20717 - gmx:100819762 1585.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g1190 4 36906152 36913729 Pvu7g0852 7 8168881 8173705 ECH
Pvu4g1190 4 36906152 36913729 Pvu4g1190 4 36906152 36913729 ECH
Pvu4g1190 4 36906152 36913729 Pvu7g0743 7 6633237 6637860 PCT
Pvu7g0744 7 6637978 6638488 Pvu4g1190 4 36906152 36913729 PCT