Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1183 ATGGCTGGTGAGGTGGTGAAGAAGGAAGAGTCTCTCAACCTGAAAATCACTAACAAGAGCCATGTGCAACCTGAGGAGAAAATTGGGAGGAAAGAGTACCAGTTGGTCACTTTTGATCTTCCCTACTTGGCCTTCTACTACAACCAGAAGCTACTGTTTTACAAAGGGGAAGACTTTGAGGGCATGGTTCAGAAGCTGAAACTTGGACTTGGTGTAGTCCTGAAGGAGTTCCATCAACTAGCTGGAAAGTTAGGGAAAGATGAAGATGGGGTGTTTAGGGTTGAGTATGATGATGACATGGTTGGTGTGGAGGTTGTTGAAGCTGTTGCTGATGAGATTGCTGTGGATCAACTAACTGTGGCTGAAAGTAGCAGCAATCTGAAGGAGCTCATACCTTATACAGGTATCTTAAACTTGGAAGGCATGCATAGACCCTTGCTGGCAGTTCAGTTAACGAAGCTGAAAGATGGGCTTGCAATGGGCCTAGCATTCAACCACGCGGTCTTGGATGGGACTGCCACGTGGCAATTCATGACCTCATGGGCCGAGCTTTGCAGCGGCTCACCCTCCACGTCAGCACCACCGTTCCTGGACCGGACAAAGGCCCGGAACACGCGAGTGAAGCTGGACCTCTCACTGCCGGAGCCCAACGAAAAACCAACTTCCAACGGCGAGGCAAAGCCCACTCTCAGGGAAAGGATATTCAAATTCTCCGAGTCAAAGATCGACAAGATCAAGTCAACGGTCAACGAGAACCCTCCATCGGACGGCTCAAAACCGTTCTCAACATTTCAGGCTCTTTCCTCCCATATTTGGCGCCATGTAAGCCATGCACGTAACCTGAAGCCGGAGGATTACACCGTGTTCACCGTCTTTGCCGACTGCCGGAAGCGGGTTGACCCACCTATGCCGGAGAGTTACTTCGGAAACCTAATTCAGGCTATATTTACCGTTACGGCGGCTGGACTTTTAGCAGCCCATCCGCAGCAATTTGCAGCTTCATTGGTGCAGAAGGCCATTGAAGCTCACAATGCAAAAGCTATTGATGAACGAAATAAGGAGTGGGAAAGTGCACCCAAGATCTTTGAATTCAAAGATGCAGGGGTGAATTGTGTGGCAGTGGGAAGCTCCCCAAGGTTCAAGGTTTATGACATTGATTTTGGGTGGGGAAAGCCAGAGAATGTGAGGAGTGGAACAAATAACAAGTTTGATGGGATGATTTATTTGTATCCAGGGAAGATTGGAGGAAGGAGCATCGATGTGGAACTAACCTTGGAGCCTGAGGCTATGGGGAGGTTGGAACAAGACAAGGAGTTTCTTTTGGAAGCATAA 1332 0.488 MAGEVVKKEESLNLKITNKSHVQPEEKIGRKEYQLVTFDLPYLAFYYNQKLLFYKGEDFEGMVQKLKLGLGVVLKEFHQLAGKLGKDEDGVFRVEYDDDMVGVEVVEAVADEIAVDQLTVAESSSNLKELIPYTGILNLEGMHRPLLAVQLTKLKDGLAMGLAFNHAVLDGTATWQFMTSWAELCSGSPSTSAPPFLDRTKARNTRVKLDLSLPEPNEKPTSNGEAKPTLRERIFKFSESKIDKIKSTVNENPPSDGSKPFSTFQALSSHIWRHVSHARNLKPEDYTVFTVFADCRKRVDPPMPESYFGNLIQAIFTVTAAGLLAAHPQQFAASLVQKAIEAHNAKAIDERNKEWESAPKIFEFKDAGVNCVAVGSSPRFKVYDIDFGWGKPENVRSGTNNKFDGMIYLYPGKIGGRSIDVELTLEPEAMGRLEQDKEFLLEA* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1183 443 Gene3D - 11 212 IPR023213 -
Pvu4g1183 443 Gene3D - 213 436 IPR023213 -
Pvu4g1183 443 Pfam Transferase family 14 439 - -
Pvu4g1183 443 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 18 439 - -
Pvu4g1183 443 PANTHER BAHD ACYLTRANSFERASE DCR-RELATED 18 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1183 Pvu-Chr4 36652624 36655704 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g1183 64 442 Monolignol Biosynthesis Gene Families AT5G48930 28.173 1.48e-37 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1183 K19747 - gmx:100818158 788.875
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g1183 4 36652624 36655704 Pvu4g1183 4 36652624 36655704 ECH