Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1177 ATGGTTACATCACTTTGTGCTAATGGTTGTGAGTTCAATGATTCTCTTACCAACAAGAACCTTTGTTCAAAGTCTTACAATGATTATCTCAAAGAAAACAACACCAAATCAAAGGGTTGTAAGGGTGTAGAGTGTGAAACGAATATGAATAACAAAAAAAATTATTTTGAGGTAACATCAAGTATTTCTAAAAGTTCTACAAGTTCTATCATTGATGATATGACTTTTGTTTTTTATATGAGTAAGAAGAATGAGAGAAAGAGATGCAACAGTTGCAAGAAGAGGATTGGATTATTAGAGTTCCAATGTCGTTGTGGAGATGTTTTTTGTGGATCACATAGATATCTAGAGATGCATGCATGCAAAATAGATTGCAAGAAAATTGGTCGTGAAGTTTTGATTAAAGAAAATCCTTTATGCATTAGTGATAAACTAAAACATAGAATTTAG 450 0.3133 MVTSLCANGCEFNDSLTNKNLCSKSYNDYLKENNTKSKGCKGVECETNMNNKKNYFEVTSSISKSSTSSIIDDMTFVFYMSKKNERKRCNSCKKRIGLLEFQCRCGDVFCGSHRYLEMHACKIDCKKIGREVLIKENPLCISDKLKHRI* 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1177 149 ProSiteProfiles Zinc finger AN1-type profile. 83 129 IPR000058 GO:0008270
Pvu4g1177 149 PANTHER AN1-TYPE ZINC FINGER PROTEIN 4 149 - -
Pvu4g1177 149 SUPERFAMILY AN1-like Zinc finger 80 143 IPR035896 -
Pvu4g1177 149 Pfam AN1-like Zinc finger 89 124 IPR000058 GO:0008270
Pvu4g1177 149 Gene3D - 1 65 - -
Pvu4g1177 149 Gene3D - 66 143 IPR035896 -
Pvu4g1177 149 SMART AN1_Zf_4 89 126 IPR000058 GO:0008270
Pvu4g1177 149 PANTHER ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 8-RELATED 4 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1177 Pvu-Chr4 36530920 36531369 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g1177 5 146 C2H2 Transcription Factor Family AT3G52800 35.065 1.19e-18 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1177 - - pvu:PHAVU_004G110800g 228.024