Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1169 ATGTCATCGCCGGGGTTCACTGGCGGAGGTGGGGCGTCCGATTACTTCGCCGGAGCGGGTGGTTTCAGCGGCAGATCCATTCCAGCGGCCACCATGAACAACCCCAACGGTGCTGCGACTGCCACCGCAAACCTCCACCCTCTCTACCGAACCCAGCAACAGAACCTTCCCGCAATGTTTCTAGATCCTGCCTCTCAGCAGATCGCCCAACGACAAACACCAACCTTCATCGGTAAACGCACCCTCACCGAATTCCAAACCTATAATCAAACCTATAACCAAACCTACAACCAACCCAACACCAACCCCAACCATGTCCTCTCCAACCTCTTGCTTCGTTCGGTCAAGCCGCGAACCAGTTTCTCTCAGGGTTCCATGGATGGCTTTCCCGAATTGCATAACCAAAACCCTTCCGTCTACCACCAACAGCAGCAGCGTTTCGGTGTTCCTTTACTTCATCAGTTCCGTCCCCAGCCCATTAACCTTCCCAGCAATGGGTCTGGGCCCATGCCAAGCCCAAATTACGGCTACCGGAACTCGAATTTGGGCATGCCACAGAACCGGGTTCGTCTTTCTGTTCCTCTCCCGCTTCCGGTTCAGGTCTCTGAGCCAGAGAAGAAGATCATGGATCATCGGCTTCTGGAATTGGAGAAGCAGCTTCTTGAAGACAACGATGAAGGAGAAGAAGCCGATGCTGCATCTGTGATAACCACTAGCGAGTGGTCTGAAACTTATCAGAATTTAATCAGTCCCGGTCCGGTTCAGAAATTGGTTTCCACGTCACCTACTTCATCAACCACATCATCTACGTCATCTTCCTCCTCTGTCGCTTCGCCTGCTTCTGGATGCTCCAAGCAAACTCTCATGGAAGCCGCATCTGCAATTGTTGAAGGAAAATATGACATGGCTATGGAGATCCTGAACCGGTTGAACGGTCCGAATTCGAACAACAGAACTGATAGATTAACCGATTGCATGGTCTTGGCGTTGAAGTCTAGGATGAATCCGGTGGAATATCCACCTCCAGTGGCGGAGCTTTTCGGCTATGAACATGCCGAGTCGACTCAGTTGATTCTGGAAAACTCCATGTGCTTTAAGATAGGGTTAATGGCTGCGAATCTTGCGATTTTGGAAGCTGCATTTGAGGAGAAAACGGAAAACAGGTTCTGCGTGTTGGATTTTGAGATTGGACAGGGAAAGCAGTATCCGCATCTCTTCAACGCGCTCTCTGCACGTGGACAGAACGTCACACTCAAGATTGTGGCGGTAGCCGAGAACGGTGGCGAAGACAGGGTGCGTGCCGTCGGAGACTCGCTGAGTCACCTAGCAGAGAGGAAGAGGATCGGGTTCGAGTTCAGACTGATAACAACTCCTAAACTCTCTGAGTTGACTCGTGAATCGCTGGGATGCAATGAGAACGAAGTTCTCATGGTGAACTTTGCGTTCAAGCTTAACAAAATTCCAGACGAGAGCGTCTCTATCGAGAATCAACGCGACGAGCTTCTCCGGCGCGTGAAGGGACTCGCGCCGCGCGTGGTGACAGTGGTTGAGCAGGAGATGAACGCGAACACAGCGCCTTTCCTGGCTCGTGTGGCAGAAACGCTGTCGTTCTATGGTATGTTGTTGGAGTCCATTGAAGCCATGAATAACAATATCAGCATCAACAACTCTGACCGAGTCAGACTCGAAGAAGGACTGAGCCGAAAGTTACACAACACAGTAGCATGCGAAGGCAGAGACCGTGTAGAACGTTGTGAAGTGTTTGGGAAATGGCGTGCGCGAATGAGCATGGCAGGGTTCGAGTTAAAGCCGCTGAGTCAAAACATGGCCGAGTCAATAAAATCAAGACTCACCGCCACCAACAACCGAGTCAACTCGGGACTGACGGTGAAGGAAGAAAACGGTGGAATTTGCTCCGGTTGGATGGGTAAAACACTCACAGTTGCATCTGTTTGGCGTTAA 1962 0.5117 MSSPGFTGGGGASDYFAGAGGFSGRSIPAATMNNPNGAATATANLHPLYRTQQQNLPAMFLDPASQQIAQRQTPTFIGKRTLTEFQTYNQTYNQTYNQPNTNPNHVLSNLLLRSVKPRTSFSQGSMDGFPELHNQNPSVYHQQQQRFGVPLLHQFRPQPINLPSNGSGPMPSPNYGYRNSNLGMPQNRVRLSVPLPLPVQVSEPEKKIMDHRLLELEKQLLEDNDEGEEADAASVITTSEWSETYQNLISPGPVQKLVSTSPTSSTTSSTSSSSSVASPASGCSKQTLMEAASAIVEGKYDMAMEILNRLNGPNSNNRTDRLTDCMVLALKSRMNPVEYPPPVAELFGYEHAESTQLILENSMCFKIGLMAANLAILEAAFEEKTENRFCVLDFEIGQGKQYPHLFNALSARGQNVTLKIVAVAENGGEDRVRAVGDSLSHLAERKRIGFEFRLITTPKLSELTRESLGCNENEVLMVNFAFKLNKIPDESVSIENQRDELLRRVKGLAPRVVTVVEQEMNANTAPFLARVAETLSFYGMLLESIEAMNNNISINNSDRVRLEEGLSRKLHNTVACEGRDRVERCEVFGKWRARMSMAGFELKPLSQNMAESIKSRLTATNNRVNSGLTVKEENGGICSGWMGKTLTVASVWR* 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1169 653 MobiDBLite consensus disorder prediction 252 283 - -
Pvu4g1169 653 ProSiteProfiles GRAS family profile. 275 653 IPR005202 -
Pvu4g1169 653 PANTHER SCARECROW-LIKE PROTEIN 8 71 652 IPR030013 -
Pvu4g1169 653 Pfam GRAS domain family 285 653 IPR005202 -
Pvu4g1169 653 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 71 652 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1169 Pvu-Chr4 36181098 36183682 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g1169 49 653 GRAS Transcription Factor Family AT5G52510 47.209 4.40e-144 432
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pvu4g1169 GRAS 1.9e-84 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1169 - - gmx:100808172 941.414
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g1169 4 36181098 36183682 Pvu4g1169 4 36181098 36183682 ECH
Pvu4g1169 4 36181098 36183682 Pvu7g0751 7 6726236 6728345 PCT