Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1159 ATGGCGGTAGGACTCTCCGCCGCCATAACCTTCAAGCCCCTCCTCCACAACCACCACCCCCACTTTCCCAAAACAATCCCAGCCACACTCCCTTTCTCTCCCTTGAGAATTTCCCACCACACAACCTTCCTAAAGATCCAAAAGTTGTCACCTTTCACTGTCTGTGTCCTCACCCAGGACCCCAAACAAAGCACCCACATGGAAATTGAGGAGCAGGAACAACAATCACCTCCTCCTCCACAAGTTTTGTCACCAAAGTTGGCAGAGAAATTGGCCAGAAAAGAGTCTGAGAGGTTCACCTACCTCATTGCTGCTCTCATGTCCAGCTTGGGTGTCACATCCATGGCAGTGCTCGCTGTTTATTACAGATTCGCCTGGCAAATGGAGGGTGGAGAAGTGCCTTTGTCTGAAATGTTTGGCACATTTGCTCTGGCAGTGGGTGCTGCTGTGGGTATGGAGTTTTGGGCTAGATGGGCTCATAGGGCTCTCTGGCATGCTTCCTTGTGGCACATGCATGAGTCCCACCATCGACCAAGAGAAGGACCCTTCGAACTGAACGATGTATTTGCCATAACCAATGCTGTCCCTGCCATTGCTCTTCTTTCCTATGGTTTCTTTCACAAGGGACTCATCCCTGGTCTTTGCTTCGGTGCGGGTCTTGGAATTACGGTCTTTGGGATGGCCTACATGTTTGTACACGATGGCTTGGTTCATAAGAGATTCCCTGTGGGCCCCATTGCCAACGTGCCCTACTTCAGAAGAGTGGCTTCTGCTCACCAACTTCACCATTCGGAAAAATTTGATGGTGTACCGTATGGGCTGTTTCTGGGACCAAAGGAAGTTGAAGAGGTGGGAGGGCTAGAAGAGCTGGAGAAAGAGATAAGTAGGAGAGCAAAATTATACAAAAATAGTTCATGA 918 0.4967 MAVGLSAAITFKPLLHNHHPHFPKTIPATLPFSPLRISHHTTFLKIQKLSPFTVCVLTQDPKQSTHMEIEEQEQQSPPPPQVLSPKLAEKLARKESERFTYLIAALMSSLGVTSMAVLAVYYRFAWQMEGGEVPLSEMFGTFALAVGAAVGMEFWARWAHRALWHASLWHMHESHHRPREGPFELNDVFAITNAVPAIALLSYGFFHKGLIPGLCFGAGLGITVFGMAYMFVHDGLVHKRFPVGPIANVPYFRRVASAHQLHHSEKFDGVPYGLFLGPKEVEEVGGLEELEKEISRRAKLYKNSS* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1159 305 Coils Coil 287 305 - -
Pvu4g1159 305 PANTHER BETA-CAROTENE 3-HYDROXYLASE 1, CHLOROPLASTIC 4 304 IPR045019 GO:0016491
Pvu4g1159 305 PANTHER BETA-CAROTENE HYDROXYLASE 4 304 - -
Pvu4g1159 305 MobiDBLite consensus disorder prediction 64 84 - -
Pvu4g1159 305 Pfam Fatty acid hydroxylase 148 275 IPR006694 GO:0005506|GO:0008610|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1159 Pvu-Chr4 35917481 35920165 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g1159 1 218 Chloroplast and Mitochondria Gene Families AT4G25700 60.360 3.19e-92 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1159 K15746 - gmx:100785541 509.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g1159 4 35917481 35920165 Pvu7g0758 7 6796953 6799198 ECH
Pvu4g1159 4 35917481 35920165 Pvu4g1159 4 35917481 35920165 ECH
Pvu4g1159 4 35917481 35920165 Pvu7g0758 7 6796953 6799198 PCT