Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1152 TCAAATTCTACATTTGAATTTGATGTTAGGGAGCTACGAGAAACCGTCGTTATCTTGGTTGGGATGCTAGACACATACTTAAATGTCTTGGCATTGGGACTTTTGTTTCTTCTTTTTGCTAGTTGGGTGGCATATGTGTTTTTTGAGGATACAATACAGGGGAAAACAGTATTCACTTCCTATGGTACTACGTTGTATCAAATGTTTCTTTTATTTACCACATCCAATAATCCAGATGTTTGGGTTCCTGCATACAAGTCTTCTCGTTGGTATGCCCTGTTCTTTGTACTGTTTGTGCTGGTGGGGGTTTACTTTGTTACAAACCTTATCCTTGCCGTTGTCTATGATAGTTTCAAGAGTGAGCTTGTGAAACAAGTTTTTGAAAAGGATCTCCTGAGAAGAACTATGCTGGAGAAAGCTTTTGATCTCTTAGATACACATAATATTGGAGCTCTCAACAAAAATCAATGCATTAGGCTCTTTGAGGAGCTCAACAAGTACAGGACTTTGCCAAAAATCTCCAGTGAAGAGTTTGAGCTGATATTTGATGAGCTGGATGATAGTCATGATATAAAGATCAACAAGGATGAATTTGCTGATATTTGCAATGCAATTGCTTTAAAATTTCAAAAGGAAGATGTTATGTCTTACTTTGAGTATTTAGCGTTCTACCAGTGGCCCAGCTCAAAGAGATTAAAAGAATTTGTAAAGAGTCCTATGTTTGGATACTTAGTGTCCTTCATTCTCATAGTAAACCTGGTTGCAGTTATTATTGAGACAACGCTTGATATAGAAAACAATTCTGGTCAAAAGCTGTGGCAAATGGTTGAGTTCGTTTTTGGGTGGATATATGTAGTAGAAATGCTTTTAAGGATTTATGCATATGGATTTGAGAACTATTGGCGGGATGGTCAAAATCGCTTTGATTTTATTATCACGGTGATAATTGCCATTGGAGAAACTGTAACTTTTGCTGTACCTGATGACGCTCTTCCTTTTATCACAAATGGAGAATGGATTCGTTACCTTCTTCTTGCAAGAATGTTGAGATTAATAAGAATCCTAATGCATGTCAAGCGATACCGAGCCTTTGTGGCAACTTTCTTGACTCTCATACCAAGTTTGATGCCATACCTAGGGATCATATTTTCTGTCTTATGCATTTATTGTTCGCTTGGTGTACAGATTTTTGGTGGAATTGTTAATGCTGGAAACCCTGAATTGGAATCAACAGCTCTTGCCGAAAATGACTATTTGGTTTTCAATTTCAATGATTACCCGAATGGAATAGTGACACTTTTCAATTTTCTTGTCACGGCAACCTGGGATGAAGTGATGACGAGTTACAAGGAATTAACTGGGACTTCTTGGACCTATTTGTACTTCATTAGCTTCTACTTAATTACTGTTTTGCTGCTTCTGAACTTGATTATTGCTTTTGTCTTGGAGGCATTCTTTGCTGAAATGGATCTTGAGTCATCAGAAAGTTCTGAAGGAACGAACAAG 1506 0.3738 SNSTFEFDVRELRETVVILVGMLDTYLNVLALGLLFLLFASWVAYVFFEDTIQGKTVFTSYGTTLYQMFLLFTTSNNPDVWVPAYKSSRWYALFFVLFVLVGVYFVTNLILAVVYDSFKSELVKQVFEKDLLRRTMLEKAFDLLDTHNIGALNKNQCIRLFEELNKYRTLPKISSEEFELIFDELDDSHDIKINKDEFADICNAIALKFQKEDVMSYFEYLAFYQWPSSKRLKEFVKSPMFGYLVSFILIVNLVAVIIETTLDIENNSGQKLWQMVEFVFGWIYVVEMLLRIYAYGFENYWRDGQNRFDFIITVIIAIGETVTFAVPDDALPFITNGEWIRYLLLARMLRLIRILMHVKRYRAFVATFLTLIPSLMPYLGIIFSVLCIYCSLGVQIFGGIVNAGNPELESTALAENDYLVFNFNDYPNGIVTLFNFLVTATWDEVMTSYKELTGTSWTYLYFISFYLITVLLLLNLIIAFVLEAFFAEMDLESSESSEGTNK 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1152 502 Gene3D - 128 205 - -
Pvu4g1152 502 SUPERFAMILY EF-hand 126 205 IPR011992 -
Pvu4g1152 502 SUPERFAMILY Voltage-gated potassium channels 238 485 - -
Pvu4g1152 502 Gene3D - 11 123 - -
Pvu4g1152 502 Gene3D - 365 502 - -
Pvu4g1152 502 Gene3D - 230 364 IPR027359 -
Pvu4g1152 502 PANTHER TWO PORE CALCIUM CHANNEL PROTEIN 1 8 499 IPR044581 GO:0005245
Pvu4g1152 502 ProSiteProfiles EF-hand calcium-binding domain profile. 173 208 IPR002048 GO:0005509
Pvu4g1152 502 Pfam Ion transport protein 239 485 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Pvu4g1152 502 Pfam Ion transport protein 11 120 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g1152 5 502 Ion Channels AT4G03560 69.339 0.0 721
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1152 K16900 - gmx:100806160 883.248