Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1093 ATGGAACAGAAACACGTTCTGTTGTCAGCATTGAGTGTTGGGGTTGGGTTAGGTGTGGGGCTTGGGTTGAGTTCAGGGCAGAAATGGGTTGGCGGGAATCGTGACTCTGATGAGATTTCCATGGAGCAGATTGTGCAGGAGCTCAGGAGGCTGGTGGTAGAAGGAAGGGACGGAAAGTGTACATTTGAGGAGTTTCCATATTACTTAAGTGAAAGAATTCGAATTTTGTTGACAAGTGCTGCATATATTCATTTGAAACATCTTCACTTTTCCAAGCACACCAGGAACCTCTCGCCAGGAAGCAGGGCTATTTTGCTATCTGGTCCAGCAGAATCTTATCAGCAAGCCCTTGCCAGAGCTTTAGCTCATTACTTTGAATCAAAGCTGCTGTTGTTAGATATTACTGACTTCTCTGTGAAGTTGCAGAACAAATTTGGATGTTCCAGAAAAGAAACATGTTTGAAAAGGTCAATCTCGGAGGCAACCTTGGAGACAATGTCTGCTTTGTTTGGTTCCTTTTCAATGCTTTCTTCAGCAGGAGAATCAAGAGGAATTGTGCGTCAACAAAGCAGTGCTACTGAAAGTTCCAATCCTCCAAAGCTTAAGAGGAATGCTTCTGCTGCATCTGATATAAGTAGCACTGCTTCCCAGTGTGGTCCAACATTTCCAGCACGTTTCAAGCGCACAAGTAGCTTGTGTTTTGATGAGAAGCTCTTTGTGCAGGCACTTTACAAGCTTTTGGTTTCTTTCTCAGAAACTAGTTCCATCATTTTATACATAAGGGATGTTGAGAAGCTCCTTCTTCAGTCAAGGTTATATAATTTACTACAAAAAATGATAAATAAACTATCAGGCTCGGTGTTGATACTTGGGTCCCAGATATTAGATTCAGATGACGATTGCAAAGAAGTTGATGAAAGGCTCACTGCGTTATTCCCCTACAACATTGAGATCAAAGCTCCTGAAGATGAAACTCATTCTGGCAATTGGAAAGGATCACTGGAAGAGGATATGAAAGCTATTCAGTTCCAAGACAACAGAAACCACATTGCTGAAGTACTAGCAGCAAATGACATTGACTGTGATGACTTGAACTCAGTCTGCTTTTCAGATACTATCTTACTCAGCAATTATATTGAAGAAATTGTAGTATCTGCAATATCTTACCATTTGATGAAAACCAAGGATCCAGAATACCGAAATGGAAAGCTAGTTATATCAGCCAATAGTTTGTCCCATGGATTGAGTCTGTTCCAGGAAGGCAAGAGTAGTGGGAATCTGAAGACTAATGAATCTAACAAGGAAAATGCTGGGGAAGATATTTCTGGTGCAAAGAATGAAGTTAAGTCTGACAATCAAGCACCCGAAAACAAGAATGAGACAGAGAAATCCATCCCGGTAACAAAGAAAGATGGCGAAAATCCTGCACCTTCCAAAGCGGAAGTTCCTGACAACGAGTTTGAGAAGCGCATAAGACCTGAGGTTATCCCTGCAAATGAGATAGGGGTTACATTTGCAGATATTGGTGCATTGGATGAGATCAAAGAGTCACTTCAAGAGCTGGTAATGCTTCCCCTTAGAAGGCCTGACCTCTTCAAAGGTGGGCTTCTAAAGCCGTGTAGAGGTATATTGCTTTTTGGGCCTCCTGGTACTGGAAAAACAATGCTAGCAAAAGCCATTGCAAATGAAGCTGGTGCAAGTTTCATTAATGTCTCAATGTCAACTATTACATCAAAATGGTTTGGAGAAGATGAAAAGAACGTCCGAGCTCTATTCACACTGGCAGCTAAGGTTTCCCCAACAATCATCTTTGTTGACGAGGTTGATAGCATGCTTGGACAGAGGACTAGAGTAGGAGAGCATGAAGCCATGAGAAAGATAAAAAATGAGTTCATGACACACTGGGATGGGCTATTAACAGGACCTAATGAGCAAATTTTGGTTCTCGCTGCAACCAACAGACCATTTGACCTTGATGAAGCTATCATCAGACGGTTTGAACGCAGGGTCCTGGTTGGTCTTCCATCTGCTGAGAACAGGGAAAAGATCTTGAAGACTCTTCTGGCTAAAGAAAAACATGAAAACTTAGACTTCAAAGACCTGGCAACCATGACAGAAGGATATACTGGAAGTGATCTTAAGAATTTGTGCATCACTGCGGCTTATCGACCTGTTAGAGAGCTGATACAGCGGGAGAGAATGAAGGAAATGGAAAAGAAGAAAAGAGAGGCTGAAGGCCAAAACTCTGAAGATGCTTCAAACAATAAAGATAAGGAAGACCAAGAAATTACCCTCAGGCCTTTGAATATGGAAGACATGAAGCAGGCTAAGAGTCAGGTGGCTGCAAGTTTTGCATCAGAAGGATCCGTAATGAATGAGTTGAAGCAATGGAATGATTTATATGGAGAAGGAGGTTCAAGGAAGAAACAACAACTCACTTACTTCCTTTAG 2451 0.419 MEQKHVLLSALSVGVGLGVGLGLSSGQKWVGGNRDSDEISMEQIVQELRRLVVEGRDGKCTFEEFPYYLSERIRILLTSAAYIHLKHLHFSKHTRNLSPGSRAILLSGPAESYQQALARALAHYFESKLLLLDITDFSVKLQNKFGCSRKETCLKRSISEATLETMSALFGSFSMLSSAGESRGIVRQQSSATESSNPPKLKRNASAASDISSTASQCGPTFPARFKRTSSLCFDEKLFVQALYKLLVSFSETSSIILYIRDVEKLLLQSRLYNLLQKMINKLSGSVLILGSQILDSDDDCKEVDERLTALFPYNIEIKAPEDETHSGNWKGSLEEDMKAIQFQDNRNHIAEVLAANDIDCDDLNSVCFSDTILLSNYIEEIVVSAISYHLMKTKDPEYRNGKLVISANSLSHGLSLFQEGKSSGNLKTNESNKENAGEDISGAKNEVKSDNQAPENKNETEKSIPVTKKDGENPAPSKAEVPDNEFEKRIRPEVIPANEIGVTFADIGALDEIKESLQELVMLPLRRPDLFKGGLLKPCRGILLFGPPGTGKTMLAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMTHWDGLLTGPNEQILVLAATNRPFDLDEAIIRRFERRVLVGLPSAENREKILKTLLAKEKHENLDFKDLATMTEGYTGSDLKNLCITAAYRPVRELIQRERMKEMEKKKREAEGQNSEDASNNKDKEDQEITLRPLNMEDMKQAKSQVAASFASEGSVMNELKQWNDLYGEGGSRKKQQLTYFL* 817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1093 816 Gene3D - 502 784 IPR027417 -
Pvu4g1093 816 MobiDBLite consensus disorder prediction 433 485 - -
Pvu4g1093 816 Pfam AAA+ lid domain 695 739 IPR041569 -
Pvu4g1093 816 Coils Coil 727 754 - -
Pvu4g1093 816 Pfam ATPase family associated with various cellular activities (AAA) 543 673 IPR003959 GO:0005524|GO:0016887
Pvu4g1093 816 MobiDBLite consensus disorder prediction 735 761 - -
Pvu4g1093 816 SMART AAA_5 539 676 IPR003593 -
Pvu4g1093 816 CDD AAA 541 674 - -
Pvu4g1093 816 ProSitePatterns AAA-protein family signature. 646 665 IPR003960 GO:0005524|GO:0016887
Pvu4g1093 816 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 502 736 IPR027417 -
Pvu4g1093 816 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 1 816 - -
Pvu4g1093 816 Gene3D - 675 778 - -
Pvu4g1093 816 MobiDBLite consensus disorder prediction 421 485 - -
Pvu4g1093 816 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 1 816 - -
Pvu4g1093 816 MobiDBLite consensus disorder prediction 187 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1093 Pvu-Chr4 32290094 32297182 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g1093 503 734 Calmodulin-binding Proteins AT3G56690 38.559 2.94e-41 161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1093 - - gmx:100817952 1428.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g0779 7 7016455 7024238 Pvu4g1093 4 32290094 32297182 PCT