Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1073 ATGATGGAGAACTTTTGGAGCATGGTTTGTGGAGAATCTGATTATCCTGGGAATGGAGTAAAACCACCTTTCAGTTACGATATCAAGTTTTTGAAAGATCCTTCTACGTGCACCTACCAGTTCTTGATTATCTGCTTTGATGTTTTGCTACTGATCATGCTAGGATTCATTTTGATACAGAAGTCTTTGTTCAAACCATTTCGTGGTCAGCTTCAGGTGGAAAGATATTCAAACTTGCAGCTAGTTTCTGCCATAACCAATGGTTTTCTGGGGTTGTTGTATGTGTGCTTAGGCATTTGGGTTTTAGAGGAGGAATTAAGAAAGAGGCACACTTTCTTCCCTCTTAAGTTGTGGTTGCCAGAGCTTTTTCTAGGATTCAGATGGTTGTTAGTAGGCCTAAGTGTAAGTCTTCAGTTGAAACAACTTCCAAGATCATGGTTGTGGTTGTTTTCTCTTCTTACGTTATTTGTTTCTATTATTTTCTGTATTCTATCCATGTCTTACACAATTAGTAGCAGAAAATTGACCTTCAAGCAAGCTCTAGATTTTCTGTCTTTTCCAGGGTCAGTTTTACTGCTCTTGTGTACTTACAAAGTATATAAATGTGAAGACACTGACAGAGAAATTGATGAAGGCCTTTACGACCCTTTGAATGGTCAATTCAGTGAAGTTGATCCAGATAATTATGTGACTCCATTTGCCAAAGCTGGATTCCTTAGTAAGATGTCATTTTGGTGGTTAAATCCATTGATGAAAAGGGGTCAAGAGAAAACACTCCAGGAAGAGGATATCCCGAAGTTACGAGAATCAGATCGAACAGAAAGTTGCTATTTGTCATATTTAGAACGTTTGAACTGGAAAAAGGGAAAAGAACCATTATCACAATCATCAGTTTTGTGGACCATAGTCTGGTGCCACAGGAGAGAGATTTTGGTGACTGGATTCTTTGCTTTGCTCAAGGTACTCACCCTGTCAACTGGTCCTGTACTTCTGAATGCTTTTATATTGGTTTCTGAGGGTAATGGAAGCTTCAAATATGAGGGTTATGTATTGGTCGTATCACTTTTCATCATAAAGATCATGGAGTCCCTGTGCCAAAGGCAGTGGTATTTCCGCAGTAGGCTTGTTGGAATGAAAGTTAGATCATTACTTACTGCAGCAATTTATAAAAAAATATTGAGGTTGTCAAGTGCAGCTAGATTGACACACTCGAGTGGTGAGATAATGAATTATGTGACTGTGGACGCTTACAGAATTGGAGAATTTCCATACTGGTTTCACCAGTTGTGGACAACAAGCCTCCAAATATGTATTGCAGTAGTAATACTTTTTCATGCTATTGGGATAGCAACAATATCCTCATTGGTAGTGATAGTCCTCACCGTGCTTTGCAACGTTCCCCTAGCAAAGTTGCAGCATGAGTTTCAGAGCAAACTCATGGTGGCACAAGATGAGCGATTGAAGGCGAGTTTTGAGGCTCTTACAAATATGAAAGTCCTGAAGCTGTATGCATGGGAAACTCATTTTAAAAATGCTATAGAAAGACTAAGAAGTTTGGAACTGAAAATTTTACGTTCAGTGCAATTGAGAAAGGCTTACAACATCTTTCTATTTTGGACCTCACCAATTTTGGTCTCTGCTGCTTCTTTTGGGACATGTTACTTCTTGAATATTCCTTTGCACGCAAATAATCTATTCACATTTGTGGCGACTATACGTCTTGTGCAGGAGCCAATTACAGGCATCCCAGATGTTATTGGGGTGGTCATTCAAGCAAGAGTAGCATTTGCCCGGATTGTTCAATTCCTTAATGCACCTGAATTGCAAAGTTTAAATTTCAGGGATAAAAGTTTTGATGGCAGTAAAGGGTCAATTACAATCAAATCTGCTGATTTTTCATGGGAAGGTAATGTATCAAAGTCAACACTAAGGAAGATAAACTTGGAGATTAGACATGGGCAAAAGCTTGCTATTTGTGGAGAAGTTGGCTCAGGCAAATCAACCCTCTTAGCTACAATTCTTGGAGAGGTTCCTATGATAAAAGGAACTATTGAAGTTCATGGAAAGTTTGCATATGTTTCTCAAACAGCATGGATACAGACAGGCACTATACGGGAAAATATTTTGTTTGGATCAAATTTGGATGCTCATAGATATGAAGAAACACTTCGTAGATCATCACTACTAAAGGATTTGGAGCTGTTTCCCTACGGAGATCTCACACAAATAGGTGAGAGAGGAGTTAACTTGAGTGGAGGCCAGAAGCAGCGAATTCAACTTGCGCGTGCTCTTTATCAGAATGCTGATGTATATCTTTTGGATGATCCATTTAGTGCTGTTGATGCACATACTGCCACAAGTTTGTTTAATGAATACATCATGGATGGTCTGAAAGAGAAAACTGTTTTACTCGTGACTCATCAAGTTGACTTTCTACCAGCGTTTGATTCTGTTTTGTTGATGTCAAATGGGGAAATCCTAGAATCTGCTCCTTATCATCATTTGTTGTCCTCAAGCCAAGAATTCCAAGATCTTGTTAATGCTCACAAGAAAACTGCTGGTTCTGACAAGCCTATGAATGCTTCTTCTTCCAAGAGGCCTTTAATATCTGCTAAAGAGATTACACAAGCTTTCAAGGAGAAACAATCAGATGCCCCAAATGGAAATCAGTTAATAAAGGAAGAGGAGAGAGAGATAGGAGACACGGGGTTGAAGCCTTACTTTCAGTATTTGAATCAGAAGAAAGGCTATATTTACTTCTTTGTGACTTCTCTTTGTCACCTCTTGTTTGTCATTTGCCAGATATTGCAAAACTCATGGATGGCTGCTAATGTTGACAGTTACCAAGTTAGCACATTGCGGCTGATTGTTGTTTACTTCATGATTGGGGCTGTTTCTACTGTTTTCTTACTGATCAGAACTCTACTTCTTGTTGCCTTGGGTATTCAATCATCAAAATATCTATTTTTACAGTTAATGAACTCCCTTTTTTCTGCACCGATGTCCTTTTATGACTCTACACCATTGGGAAGAATACTTAGTCGGGTCTCATCAGATTTAAGCATTATGGATATTGATATCCCTTTTATTATTGCTTTTACTGTGGGAGGTACTACAAACTTCTATACTAACCTCACAGTTTTAGCAATTATCACTTGGCAAATCTTGTTTATCGCTGTACCGATGCTTTACATTGCAATACGCTTGCAGAGATACTACTTTTCCACTGCAAAAGAAGTGATGCGGATGAATGGCACAACAAAGTCATTGGTAGCTAATCATGTAGCTGAAACTACTGCTGGAGTTGTGACAATAAGAGCCTTTGAGGAAGAAGATCGTTTCTTTGAGAAGAATCTTGATCTAATTGACATCAATGCCAGTCCCTTCTTCCACAGTTTTGCCTCAAATGAGTGGCTGATCCAGAGATTAGAAATAGTTAGTGCAGTACTTCTTTCCTCCACAGCACTATGCATGGTTACTCTTCCACCAGGGACTTTCAGCTCTGGATTCATTGGCATGGCTCTCTCATATGGCCTTACACTAAATGCTCAACTAGTATTTTCAATTCAAAGTCAATGCAATCTAGCAAATTACATAATTTCTGTAGAGAGGCTAAATCAATATATGCATATACCAAGTGAAGTAATAGAAGGAAATCGTCCTCCTTCAAATTGGCCAGTTGCTGGTAAAGTAGAACTAAATGACTTGCAGGTACGATACAGGCCTGATGGACCACTTATACTCCATGGAATCACATGCACATTCAAAGCAGGACACAAGATTGGAATAGTTGGAAGGACAGGCAGTGGGAAGTCCACTCTCATCAGTGCATTATTTCGTCTTGTGGAGCCAGCAGGTGGAAAAATTGTAGTTGATGGCATAGACATATCTTCTATTGGCCTTCATGATTTGAGGTCACGTTTTGGTGTAATACCTCAGGATCCTACTCTTTTTAATGGGACTGTTAGATATAATTTGGACCCTTTATCTCAATACTCTGATCACGAGATATGGGAGGTTCTTGGGAAGTGTCAGCTACGAGAAGTTGTCCAAGAAAAATTTCAGGGCCTAAACTCCCCAGTTGTTGAAGATGGATCAAACTGGAGCATGGGACAAAGGCAATTATTTTGTTTGGGGCGTGCACTTTTAAGGAGAAGTAGGATATTGGTGTTGGATGAAGCAACTGCATCAATTGACAATGCAACTGATTTGATTCTGCAAAAAACAATTAGAACTGAGTTTGCAGATTGCACAGTGATCACAGTAGCACACAGGATACCAACTGTGATGGATTGCACAATGGTTCTTGCAATCAGTGATGGAAGGTTAGTAGAGTATGATGTACCAACGAGCTTGATGATGAAAGAAGGATCGTTGTTCAAGCAACTTGTGAAAGAGTATTGGTCTCATTTCCAATCTGCAGAATCACATTGA 4434 0.3933 MMENFWSMVCGESDYPGNGVKPPFSYDIKFLKDPSTCTYQFLIICFDVLLLIMLGFILIQKSLFKPFRGQLQVERYSNLQLVSAITNGFLGLLYVCLGIWVLEEELRKRHTFFPLKLWLPELFLGFRWLLVGLSVSLQLKQLPRSWLWLFSLLTLFVSIIFCILSMSYTISSRKLTFKQALDFLSFPGSVLLLLCTYKVYKCEDTDREIDEGLYDPLNGQFSEVDPDNYVTPFAKAGFLSKMSFWWLNPLMKRGQEKTLQEEDIPKLRESDRTESCYLSYLERLNWKKGKEPLSQSSVLWTIVWCHRREILVTGFFALLKVLTLSTGPVLLNAFILVSEGNGSFKYEGYVLVVSLFIIKIMESLCQRQWYFRSRLVGMKVRSLLTAAIYKKILRLSSAARLTHSSGEIMNYVTVDAYRIGEFPYWFHQLWTTSLQICIAVVILFHAIGIATISSLVVIVLTVLCNVPLAKLQHEFQSKLMVAQDERLKASFEALTNMKVLKLYAWETHFKNAIERLRSLELKILRSVQLRKAYNIFLFWTSPILVSAASFGTCYFLNIPLHANNLFTFVATIRLVQEPITGIPDVIGVVIQARVAFARIVQFLNAPELQSLNFRDKSFDGSKGSITIKSADFSWEGNVSKSTLRKINLEIRHGQKLAICGEVGSGKSTLLATILGEVPMIKGTIEVHGKFAYVSQTAWIQTGTIRENILFGSNLDAHRYEETLRRSSLLKDLELFPYGDLTQIGERGVNLSGGQKQRIQLARALYQNADVYLLDDPFSAVDAHTATSLFNEYIMDGLKEKTVLLVTHQVDFLPAFDSVLLMSNGEILESAPYHHLLSSSQEFQDLVNAHKKTAGSDKPMNASSSKRPLISAKEITQAFKEKQSDAPNGNQLIKEEEREIGDTGLKPYFQYLNQKKGYIYFFVTSLCHLLFVICQILQNSWMAANVDSYQVSTLRLIVVYFMIGAVSTVFLLIRTLLLVALGIQSSKYLFLQLMNSLFSAPMSFYDSTPLGRILSRVSSDLSIMDIDIPFIIAFTVGGTTNFYTNLTVLAIITWQILFIAVPMLYIAIRLQRYYFSTAKEVMRMNGTTKSLVANHVAETTAGVVTIRAFEEEDRFFEKNLDLIDINASPFFHSFASNEWLIQRLEIVSAVLLSSTALCMVTLPPGTFSSGFIGMALSYGLTLNAQLVFSIQSQCNLANYIISVERLNQYMHIPSEVIEGNRPPSNWPVAGKVELNDLQVRYRPDGPLILHGITCTFKAGHKIGIVGRTGSGKSTLISALFRLVEPAGGKIVVDGIDISSIGLHDLRSRFGVIPQDPTLFNGTVRYNLDPLSQYSDHEIWEVLGKCQLREVVQEKFQGLNSPVVEDGSNWSMGQRQLFCLGRALLRRSRILVLDEATASIDNATDLILQKTIRTEFADCTVITVAHRIPTVMDCTMVLAISDGRLVEYDVPTSLMMKEGSLFKQLVKEYWSHFQSAESH* 1478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1073 1477 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 621 848 IPR027417 -
Pvu4g1073 1477 Gene3D ABC transporter type 1, transmembrane domain 294 610 IPR036640 GO:0005524|GO:0016021
Pvu4g1073 1477 ProSitePatterns ABC transporters family signature. 750 764 IPR017871 GO:0005524
Pvu4g1073 1477 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 921 1197 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Pvu4g1073 1477 CDD ABCC_MRP_domain2 1229 1449 - -
Pvu4g1073 1477 CDD ABC_6TM_ABCC_D1 312 599 IPR044746 GO:0140359
Pvu4g1073 1477 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 311 591 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Pvu4g1073 1477 Pfam ABC transporter 643 777 IPR003439 GO:0005524
Pvu4g1073 1477 Pfam ABC transporter 1248 1396 IPR003439 GO:0005524
Pvu4g1073 1477 Gene3D ABC transporter type 1, transmembrane domain 884 1215 IPR036640 GO:0005524|GO:0016021
Pvu4g1073 1477 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 627 848 IPR003439 GO:0005524
Pvu4g1073 1477 CDD ABC_6TM_ABCC_D2 916 1209 IPR044726 GO:0140359
Pvu4g1073 1477 SMART AAA_5 652 825 IPR003593 -
Pvu4g1073 1477 SMART AAA_5 1257 1450 IPR003593 -
Pvu4g1073 1477 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1221 1463 IPR027417 -
Pvu4g1073 1477 SUPERFAMILY ABC transporter transmembrane region 299 599 IPR036640 GO:0005524|GO:0016021
Pvu4g1073 1477 Gene3D - 1216 1466 IPR027417 -
Pvu4g1073 1477 Gene3D - 619 854 IPR027417 -
Pvu4g1073 1477 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1231 1465 IPR003439 GO:0005524
Pvu4g1073 1477 SUPERFAMILY ABC transporter transmembrane region 905 1214 IPR036640 GO:0005524|GO:0016021
Pvu4g1073 1477 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 72 1477 - -
Pvu4g1073 1477 CDD ABCC_MRP_domain1 625 825 - -
Pvu4g1073 1477 Pfam ABC transporter transmembrane region 311 577 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Pvu4g1073 1477 Pfam ABC transporter transmembrane region 918 1161 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Pvu4g1073 1477 PANTHER ABC TRANSPORTER C FAMILY PROTEIN 72 1477 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1073 Pvu-Chr4 29623208 29629409 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g1073 1227 1477 Calmodulin-binding Proteins AT2G36910 30.196 1.49e-28 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1073 K05666 - gmx:100787314 2607.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g1073 4 29623208 29629409 Pvu7g0802 7 7274326 7281929 ECH
Pvu4g1073 4 29623208 29629409 Pvu4g1073 4 29623208 29629409 ECH
Pvu4g1073 4 29623208 29629409 Pvu7g0802 7 7274326 7281929 PCT