Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1072 ATGATGAAGGAATTTTGGAGCATGTTTTGTGCAGAAGCTGATTGTCCTGGGACTAGAGGAAAGCAACCCTTTTGTTTTGATTTGAAGATTTTGAAAAATCCTTCTTCGTGCTTCAACCAGTTCTTGATCTTTTTCTTTGATGTGTCAGTGCTGGCCATGCTGGCATTGATTATGATCCAGAAGTACTTGTTCAGACCATTTCAGGGTATGTTTCAGATGGGAAGATATTCAAACTTGCAGAAAATTTCTTCCATAACCAATGCATCTCTGGGGTTGTTGTATTTGTGCTTAGGCATTTGGATTTTAGAGGAGAACTTAAGGAAGAGTCACACTCTTCTTCCACTTAATGAGTGGCTGTTAGAACTTTTTGAAGGATTCAGATGGTTCTTAGTAGGCTTAAGTGTAAGTCTTAAGTTGAAACAACTTCCAAGATCATGGTTGTGGTTGTTTACACTTATTACACTATTTGTTTCGAGTATTTTCTGTGTTTTATCTGTGTCTTATGCAATTAATATCAGAGAACTGCACTTCAAGGAAGCTTTAGATGTTCTATCTTTTCCAGGAGCAGTTTTACTACTCTTGTGCACTTATAAAGCATCTAAACGTGAAGACAATGCTACAAGAATTGATGAAGACTTTTATGACTCTTTAAACTGCCACTTTAATGAAGTTGATCCTTATAACTACGTAACCCCATTTGCTAAAGCTGGATTCCTTAGTAGGATGTCATTTTGGTGGTTGAATCCATTGATGAAAATCGGTCAAGAGAAAACACTTCAGGATGAGGATATGCCAAAGTTACCAGAATCGGATCGAGCAGAACTTTGCTACTTGTCATTTTTAGAACAATTGAACAAGCAAAAAGATAAAGAATCATTGCCACAATCATCAATTTTGTGGGCAATAATTTTGTGCCACAGGAAAGATATTTTGATGTCCGGATTGTTTGCATTGCTCAAGGTACTCACTGTATGTACTGGTCCTGTACTTTTGAATGCTTTTATATCGATTGCTGAGGGTAATGGCAATTTCAAATATGAGGGTTATGTATTGGTCATATCACTATTCATCATAAAGATCGTAGAGTCCCTTTCACAAAGGCAATGGTATTTTCACACTAGGCTTGTTGGGATGAAAGTTAGGTCACTACTCACAGCTTCCATCTATAAAAAAATATTGAGGTTGTCAAGTGCAGCTAAATTGACTCACTCTGGTGGTGAGATAATGAATTATGTGACTGTGGATGCTTACAGAATTGGAGAATTCCCATTTTGGTTTCACCAGACATGGACAACAAGCCTCCAACTATGTATTGCACTTGTAATACTTTTTCGTGCTATTGGCCTAGCAACAATTGCCTCATTGGTGGTGATAGTTCTCACTGTGCTTTGCAATACTCCTCTAGCAAAGATGCAACATCAGTTTCAGACTAAACTCGTGGTGGCACAAGATAAGAGATTGAAGGTTAGTTCTGAGGCTCTTGTGAATATGAAAGTTCTGAAGCTATATGCCTGGGACACCCATTTTAAAAATGCTATTGAAAGATTAAGAAATATGGAACTGAAATTTTTAGGTGCAGTGCAACTGATAAAGGCATACAACATCATTTTATTTTGGACCTCACCTGTTTTGGTGTCTTCTGCTTCTTTTGGTGCATGCTACTTTTTGAACGTTCCTTTACATGCAAACAATGTTTTCACTTTTGTGGCAACTTTACGCCTGGTGCAAGAACCAATTGCAGCCATACCAGATGTTGTTGGGGTAGTCATTCAAGCAAAAGTCGCATTTGCCAGGATTGTTAATTTCCTTGAGGCATCTGAATTACAAAGTGCAAAATTCAGGAATAGGTGTTTTGATGATAGTAATAAAGGCCCAATTTCAATAAAATCTGCTGACTTTTCATGGGAAGGCAATGTATCAAAGTCAACACTGAGGAACATAAACTTGGAGATTAGACATGGGCAGAAGTTGGCAATTTGTGGAGAAATTGGTTCAGGAAAATCAACCCTCTTAACAACAATTCTCTGTGAAGTTCCTGTGACAAAGGGAACTATACAAGTTTATGGAAAGTTTGCATATGTTTCTCAAACAGCATGGATACAAACAGGAACAATACGGGAAAATATTTTGTTTGGATCTGATTTGGATGCTCCGAGATATCAAGAAACACTTCGTAGATCATCACTACTAAAGGATTTGGAGCTTTTCCCCCACGGAGATCTCACACAAATAGGTGAGAGAGGAGTTAACTTGAGTGGAGGTCAAAAGCAGCGAATTCAACTTGCACGTGCACTTTATCAGAATGCTGATGTGTATCTTTTGGATGATCCATTTAGTGCTGTTGATGCACATACTGCCACAAATTTGTTTAATGAATACATCATGAATGGTCTTAAAGAGAAAACTGTTTTGCTCGTTACTCATCAAGTTGACTTTCTACCAGCGTTTGATTCTGTTTTGTTGATGTCAAATGGGAAAATCCTAGAAGTTGCCCCTTATCATCATTTGTTGACGTCAAGCCGAGAATTCCAATATCTTGTTAATGCTCACAATGAAACTGCAGGTTCTGACAACCTTATGAATGTTTTTTCTTCCCAGAGGCATTCAACTTCTGTCAGAGAGAATACACAAGCTTTCATGGAGAAGCAGTTAAAAGCAACAAATGAAAATCAGTTAATAAAGGAAGAAGAGAGAGAGATAGGAAACACAGGGTTGAAACCGTACTTGCAATATTTGAATGGGAAGAAAGGTTATGCATACTTCTTTATGGCTTCTTTTTGTCACCTCATGTTTGTCATTTGCCAGATACTGCAAAACTCATGGATGGCTGCAAATGTTGACAATACCCAAGTCAGCACATTGCGGTTGATTGTAGTTTACTTCTTTATTGGGGTTGCTTCTATAATTTTCTTGTTGACCAGAACTCTGCTTGTAGTTGCCTTTGGTATTCAATCATCAACATATTTTTTTGTACAGTTACTGAACACCCTTTTTCGTGCACCAATGTCCTTTTATGATTGTACACCATTGGGAAGGATACTTAGCAGGGTCTCATCAGATCTAAGCATTATGGATCTTGATATACCTTTTATCCTAAGTTTCACCGTGGTAGGTGCTATATACTTATGTTCTAATCTCACAGTCCTAGCAATTGTCTCTTGGCAAGTCGTGGTTGTCTCCTTACCGATGGTTTATGCTGCAATTCACTTGCAGAGATACTATTTTTCCACTGCAAAAGAATTGATGCGCGTGAATGGCACAACAAAATCATTTGTAGCTAATCATATAACTGAAACAACTGCTGGAGCTGTGACAATAAGAGCTTTTGAGGAAGAAGATCGCTTTTTCAAGAAGAATCTTGATCTAATTGATATCAATGCCAGTCCCTTCTTTCATAGTTTTGCCTCAAATGAGTGGTTGATCCAAAGATTAGAAATAATTAGTGCATTACTTCTTACCTCTGCAGCACTGTGCATGGTTATGCTTCCACCAGGAACTTTCAGCTCTGGATTGGTTGGCTTGACTCTCTCTTATGGCTTTACCTTAAATGCTTCCTTAGTATTTTTAATTCAAAGTCAATGCAGTCTAGAAAATTACATAGTATCCGTAGAGAGGCTAAATCAATATATGCATATACCAAGTGAGGCACCAGAAGTAATAGAAGGAAATCGTCCTCCTTCAAATTGGCCAGTTGCTGGTAAAGTAGAACTAAATGACTTGCAGGTACGATACAGGCCATATGGAGCTCTTATACTCCATGGAATCACATGCACATTCAAAGCAGGACACAAGATTGGAATCGTTGGAAGGACAGGCAGTGGGAAGTCCACTCTTATTAGTGCTTTATTTCGTCTTGTGGAGCCAGCAGGTGGAAAAATTGTGGTTGATGGCATAGACATATCTTCTATTGGCCTTCATGATTTGAGATCACGTTTTGGAGTTATACCTCAGGATCCTACCCTTTTTAATGGAACTGTCAGATATAATTTGGACCCTTTATCTCAATACTCTGATCAACAAATATGGGAGGTTCTTGGGAAGTGTCAGCTGCGTGAAGTTGTACAAGAGAAAGAGGAGGGACTAAACTCCTCAGTTGTTGAAGATGGATCAAACTGGAGCATGGGACAAAGGCAATTATTTTGTTTGGGGCGTGCGCTGTTAAGGAGAAGTAGGATATTGGTGTTGGATGAAGCCACTGCTTCTATTGACAATGCTACTGATTTGATTCTGCAGAAAACCATTAGGACTGAGTTTGCAGATTGTACAGTGATCACAGTAGCACACAGAATACCAACCGTGATGGATTGCAGTATGGTTCTTTCAATTAGTGATGGAAAATTGATGGAGTACGATGAACCAGTTAACTTGATGAACAAAGAAGGATCGCTATTCAAGCAGCTTATCAAGGAATACTGGTCTCATTTTCATTCTGCAGAATCATATTGA 4446 0.3851 MMKEFWSMFCAEADCPGTRGKQPFCFDLKILKNPSSCFNQFLIFFFDVSVLAMLALIMIQKYLFRPFQGMFQMGRYSNLQKISSITNASLGLLYLCLGIWILEENLRKSHTLLPLNEWLLELFEGFRWFLVGLSVSLKLKQLPRSWLWLFTLITLFVSSIFCVLSVSYAINIRELHFKEALDVLSFPGAVLLLLCTYKASKREDNATRIDEDFYDSLNCHFNEVDPYNYVTPFAKAGFLSRMSFWWLNPLMKIGQEKTLQDEDMPKLPESDRAELCYLSFLEQLNKQKDKESLPQSSILWAIILCHRKDILMSGLFALLKVLTVCTGPVLLNAFISIAEGNGNFKYEGYVLVISLFIIKIVESLSQRQWYFHTRLVGMKVRSLLTASIYKKILRLSSAAKLTHSGGEIMNYVTVDAYRIGEFPFWFHQTWTTSLQLCIALVILFRAIGLATIASLVVIVLTVLCNTPLAKMQHQFQTKLVVAQDKRLKVSSEALVNMKVLKLYAWDTHFKNAIERLRNMELKFLGAVQLIKAYNIILFWTSPVLVSSASFGACYFLNVPLHANNVFTFVATLRLVQEPIAAIPDVVGVVIQAKVAFARIVNFLEASELQSAKFRNRCFDDSNKGPISIKSADFSWEGNVSKSTLRNINLEIRHGQKLAICGEIGSGKSTLLTTILCEVPVTKGTIQVYGKFAYVSQTAWIQTGTIRENILFGSDLDAPRYQETLRRSSLLKDLELFPHGDLTQIGERGVNLSGGQKQRIQLARALYQNADVYLLDDPFSAVDAHTATNLFNEYIMNGLKEKTVLLVTHQVDFLPAFDSVLLMSNGKILEVAPYHHLLTSSREFQYLVNAHNETAGSDNLMNVFSSQRHSTSVRENTQAFMEKQLKATNENQLIKEEEREIGNTGLKPYLQYLNGKKGYAYFFMASFCHLMFVICQILQNSWMAANVDNTQVSTLRLIVVYFFIGVASIIFLLTRTLLVVAFGIQSSTYFFVQLLNTLFRAPMSFYDCTPLGRILSRVSSDLSIMDLDIPFILSFTVVGAIYLCSNLTVLAIVSWQVVVVSLPMVYAAIHLQRYYFSTAKELMRVNGTTKSFVANHITETTAGAVTIRAFEEEDRFFKKNLDLIDINASPFFHSFASNEWLIQRLEIISALLLTSAALCMVMLPPGTFSSGLVGLTLSYGFTLNASLVFLIQSQCSLENYIVSVERLNQYMHIPSEAPEVIEGNRPPSNWPVAGKVELNDLQVRYRPYGALILHGITCTFKAGHKIGIVGRTGSGKSTLISALFRLVEPAGGKIVVDGIDISSIGLHDLRSRFGVIPQDPTLFNGTVRYNLDPLSQYSDQQIWEVLGKCQLREVVQEKEEGLNSSVVEDGSNWSMGQRQLFCLGRALLRRSRILVLDEATASIDNATDLILQKTIRTEFADCTVITVAHRIPTVMDCSMVLSISDGKLMEYDEPVNLMNKEGSLFKQLIKEYWSHFHSAESY* 1482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1072 1481 CDD ABCC_MRP_domain1 626 826 - -
Pvu4g1072 1481 SUPERFAMILY ABC transporter transmembrane region 299 599 IPR036640 GO:0005524|GO:0016021
Pvu4g1072 1481 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 311 591 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Pvu4g1072 1481 CDD ABCC_MRP_domain2 1233 1453 - -
Pvu4g1072 1481 SUPERFAMILY ABC transporter transmembrane region 908 1215 IPR036640 GO:0005524|GO:0016021
Pvu4g1072 1481 Pfam ABC transporter 1252 1400 IPR003439 GO:0005524
Pvu4g1072 1481 Pfam ABC transporter 644 778 IPR003439 GO:0005524
Pvu4g1072 1481 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 72 1480 - -
Pvu4g1072 1481 Gene3D - 1219 1471 IPR027417 -
Pvu4g1072 1481 Pfam ABC transporter transmembrane region 920 1181 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Pvu4g1072 1481 Pfam ABC transporter transmembrane region 311 575 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Pvu4g1072 1481 CDD ABC_6TM_ABCC_D2 921 1210 IPR044726 GO:0140359
Pvu4g1072 1481 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 628 849 IPR003439 GO:0005524
Pvu4g1072 1481 Gene3D ABC transporter type 1, transmembrane domain 882 1216 IPR036640 GO:0005524|GO:0016021
Pvu4g1072 1481 Gene3D ABC transporter type 1, transmembrane domain 281 607 IPR036640 GO:0005524|GO:0016021
Pvu4g1072 1481 Gene3D - 620 855 IPR027417 -
Pvu4g1072 1481 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1235 1469 IPR003439 GO:0005524
Pvu4g1072 1481 CDD ABC_6TM_ABCC_D1 313 599 IPR044746 GO:0140359
Pvu4g1072 1481 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1225 1466 IPR027417 -
Pvu4g1072 1481 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 922 1198 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Pvu4g1072 1481 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 622 848 IPR027417 -
Pvu4g1072 1481 SMART AAA_5 1261 1444 IPR003593 -
Pvu4g1072 1481 SMART AAA_5 653 826 IPR003593 -
Pvu4g1072 1481 ProSitePatterns ABC transporters family signature. 751 765 IPR017871 GO:0005524
Pvu4g1072 1481 PANTHER ABC TRANSPORTER C FAMILY PROTEIN 72 1480 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1072 Pvu-Chr4 29584479 29590713 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g1072 620 871 Calmodulin-binding Proteins AT2G36910 30.403 6.75e-25 111
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g1072 4 29584479 29590713 Pvu7g0803 7 7299241 7306437 PCT