Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1070 ATGAATCTGCTTGGACCCAGTCTTGAAGATCTATTCAACTTCTGTAGTAAAAAGCTTTCACCAAAGACAATCAACCATGTTGAGTTCATTCATTCTAAATTGTTTCTGCATCGAGATATCAAACCAGATAATTTTCTAATGGGATTAGGAAGGCATGCAAACCAGGTCAGTAGTCTTGTTAAAATGTTTATGATTGATTTTGGTTTGGCTAAGAAATACAGAGATAGCTCAACACATCAACATATTCCTTACAGGTACGAAGATTTATTGGCATGCATTAAATTTAGTACTTATCTAGAACGTAGTGTAAGGCCTTGA 318 0.3491 MNLLGPSLEDLFNFCSKKLSPKTINHVEFIHSKLFLHRDIKPDNFLMGLGRHANQVSSLVKMFMIDFGLAKKYRDSSTHQHIPYRYEDLLACIKFSTYLERSVRP* 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1070 105 ProSitePatterns Serine/Threonine protein kinases active-site signature. 35 47 IPR008271 GO:0004672|GO:0006468
Pvu4g1070 105 ProSiteProfiles Protein kinase domain profile. 1 105 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu4g1070 105 Pfam Protein kinase domain 18 80 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu4g1070 105 PANTHER CASEIN KINASE-RELATED 1 87 - -
Pvu4g1070 105 SUPERFAMILY Protein kinase-like (PK-like) 1 87 IPR011009 -
Pvu4g1070 105 PANTHER CASEIN KINASE I 1 87 - -
Pvu4g1070 105 Gene3D Transferase(Phosphotransferase) domain 1 1 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1070 Pvu-Chr4 29495947 29496433 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Pvu4g1070 Pkinase 1.5e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1070 K02218 - pvu:PHAVU_004G100600g 218.394