Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1062 ATGGAGGCCAGGGTCTCTTCCTCTCTGGGCCTCCCTTCTCCGAAGCCCCATGAAATCTCAATCTCCACAACCCTCTCCGACTTCCCCTCCCTCCTCACCCACTTACCCCCCTTCGCCTCCACCACCTCCGTCAAATGGCCCCGCCCCAGCCCAAAATCCCAGTCCCTCAAAACCCTCCCTCTCTTAGACCGGGCCCTAATCGGCGCCGCCGCAGGTGGCCTTGCCGGTGCATTCACCTACGTTTGCCTCCTCCCCCTCGACACCATCAAAACCAAGATGCAGACCAAAGGCGCTGCGCAAATTTACAAAAACACCCTCGACGCAGTCGTGAAAACATTCCAGTCCAGCGGCCTCCTCGGCTTCTACAGCGGCGTCTCCGCCGTCATAGTCGGTTCAACCGCCTCATCCGCCGTCTACTTCGGCACCTGCGAGTTTGGCAAATCGTTCCTTGGAAAACTCGAAAATTTCCCCGCCGTCCTGATCCCCCCAACCGCCGGCGCCATGGGGAACGTCGCCTCCTCGGCGATCATGGTACCCAAGGAGCTCATCACACAGCGAATGCAAGCCGGCGCGAAGGGACGCTCCTGGCAAGTCCTCGTCGAAATTCTCCAAAACGATGGCGTTATGGGCCTCTACGCTGGGTATTCGGCAACGTTGCTCCGAAACCTACCCGCAGGGGTTCTGAGTTATTCCTCCTTCGAGTATCTAAAAGCCGCGGTGCTGCAGAAAACGGAGAAAAACTACTTGGAACCGGTTCAGAGCGTTCTGTGTGGGGCTCTCGCGGGGGCCATTTCGGCGTCGCTTACGACACCGTTGGACGTGGTGAAGACGCGGTTGATGACGCAGGTGCGCGGCGAGGGGGTGGGTAAGGTTTCGGCGGTTATGTACGACGGCATTTCGGCGACGGTGAAGCAAATTTTGAAGGAAGAAGGGTGGGTGGGGCTGACACGTGGTATGGGGCCAAGGGTGCTTCACAGCGCGTGCTTTTCCGCATTGGGGTACTTCGCTTTTGAGACGGCGAGGCTTGGGATTTTGCAGGAGTATCTGAGGAGGAAGGAGTTGAGTGAAAGACAAACTCAAGTTTCTGTTTCTACTGCCTGA 1101 0.5795 MEARVSSSLGLPSPKPHEISISTTLSDFPSLLTHLPPFASTTSVKWPRPSPKSQSLKTLPLLDRALIGAAAGGLAGAFTYVCLLPLDTIKTKMQTKGAAQIYKNTLDAVVKTFQSSGLLGFYSGVSAVIVGSTASSAVYFGTCEFGKSFLGKLENFPAVLIPPTAGAMGNVASSAIMVPKELITQRMQAGAKGRSWQVLVEILQNDGVMGLYAGYSATLLRNLPAGVLSYSSFEYLKAAVLQKTEKNYLEPVQSVLCGALAGAISASLTTPLDVVKTRLMTQVRGEGVGKVSAVMYDGISATVKQILKEEGWVGLTRGMGPRVLHSACFSALGYFAFETARLGILQEYLRRKELSERQTQVSVSTA* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1062 366 Gene3D Mitochondrial carrier domain 22 192 IPR023395 -
Pvu4g1062 366 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 35 358 - -
Pvu4g1062 366 PANTHER PROTEIN MITOFERRINLIKE 1, CHLOROPLASTIC 35 358 - -
Pvu4g1062 366 ProSiteProfiles Solute carrier (Solcar) repeat profile. 249 343 IPR018108 -
Pvu4g1062 366 ProSiteProfiles Solute carrier (Solcar) repeat profile. 63 149 IPR018108 -
Pvu4g1062 366 ProSiteProfiles Solute carrier (Solcar) repeat profile. 157 239 IPR018108 -
Pvu4g1062 366 Gene3D Mitochondrial carrier domain 193 365 IPR023395 -
Pvu4g1062 366 Pfam Mitochondrial carrier protein 250 341 IPR018108 -
Pvu4g1062 366 Pfam Mitochondrial carrier protein 69 152 IPR018108 -
Pvu4g1062 366 Pfam Mitochondrial carrier protein 164 242 IPR018108 -
Pvu4g1062 366 SUPERFAMILY Mitochondrial carrier 66 338 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1062 Pvu-Chr4 29213351 29215212 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g1062 157 346 Chloroplast and Mitochondria Gene Families AT2G30160 24.286 4.07e-08 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1062 K15111 - gmx:100805903 590.882