Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1045 ATGGATGCACAAGCCAAGAAAAAGGCTTTGTTTCGTGCTAAATTGAATGCCCAGAAGAAGGAGAAGCGTATAGAATCTCCCCTTGTGAGGTATAATGAATTTGATCAACCTGTTTGCCGGGTTTGTGGTGTTGTTCTGAAGTCTGAGTCTTTATGGGATGCACACCAAGTTTCTCGTAAGCATCGTGAGGAAATAAGTAATCTGAAAGCTAATGCTGCTGGATTAACTCAACAAAATAATGCGAAGCCTGTTTCTGATACCATCATTCCCAAGGCTAAACCAGACCATCCTTTGGGCTCACAATCAAAACTTCCAGAAGGTTCGAGAGAAGTGTCTAAACCTCAATCATCATCAGTGCTTCCGCCTGGTTTTTTTGATGACAATGATCCAGGAAAGACAAGATCTGAACATTTAGCAGCCTCTGATTTAGGTAGAAAACCTGGGGTTTCTGCCAAAAATCAGACGTTAAACTTGGAGAAGGAGAAAGGTCATTTTCATGACAATAAAGCTGCAGAGTCAAATGTTAGCGAAGCCTCAACGGAGAGTAAGCAGACATCAGTCAAGACTACTGATACAGAGACACAAGTAAAAGGGAGTCTGCCTGAAGGATTTTTTGACAATAAGGAAGCTGATTTGCGTGCCCGTGGCATAAAGCTTGTTAAGCCAGATGTCAAAGACGAATACAAGGAATTTGAGAAGTTGATTCAAGAAGATTTGCAGGAGGTTGACAACCGGTTGGAGGAAGAAGAGATTGATGCGGCCGAAATGATAGAGGAAGCTGAATCTGTAGAGCAGAAGGTCTTAAGGGAGAAGGTAGAAATGTTAAAGAAGAGGAGATTGGATCTAAAATCTGCTACTGCTGCAAAGCGTAATAAATCATCTGAGGTTGTAGCCAAGGAATCTACACACGAAGGGTCATCCAGTGATGAGGAAAGTGAAGAAAATTTTGCCGTGGATTGGAGAGCACAACACTTGTAA 978 0.4213 MDAQAKKKALFRAKLNAQKKEKRIESPLVRYNEFDQPVCRVCGVVLKSESLWDAHQVSRKHREEISNLKANAAGLTQQNNAKPVSDTIIPKAKPDHPLGSQSKLPEGSREVSKPQSSSVLPPGFFDDNDPGKTRSEHLAASDLGRKPGVSAKNQTLNLEKEKGHFHDNKAAESNVSEASTESKQTSVKTTDTETQVKGSLPEGFFDNKEADLRARGIKLVKPDVKDEYKEFEKLIQEDLQEVDNRLEEEEIDAAEMIEEAESVEQKVLREKVEMLKKRRLDLKSATAAKRNKSSEVVAKESTHEGSSSDEESEENFAVDWRAQHL* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1045 325 Coils Coil 232 273 - -
Pvu4g1045 325 Gene3D Classic Zinc Finger 32 70 - -
Pvu4g1045 325 MobiDBLite consensus disorder prediction 157 171 - -
Pvu4g1045 325 MobiDBLite consensus disorder prediction 71 203 - -
Pvu4g1045 325 MobiDBLite consensus disorder prediction 283 325 - -
Pvu4g1045 325 SUPERFAMILY beta-beta-alpha zinc fingers 34 69 IPR036236 -
Pvu4g1045 325 MobiDBLite consensus disorder prediction 71 85 - -
Pvu4g1045 325 Pfam Zinc-finger of C2H2 type 39 61 - -
Pvu4g1045 325 PANTHER UNCHARACTERIZED 1 325 IPR040050 GO:0003676|GO:0005681|GO:0008270
Pvu4g1045 325 Coils Coil 58 78 - -
Pvu4g1045 325 MobiDBLite consensus disorder prediction 172 197 - -
Pvu4g1045 325 MobiDBLite consensus disorder prediction 105 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1045 Pvu-Chr4 28410667 28420195 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g1045 1 325 C2H2 Transcription Factor Family AT3G02860 54.030 1.32e-98 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1045 K13104 - gmx:100808515 514.612