Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1042 ATGCAACCTTCAACTAGCAGTTTTTTAAAACCAAAAACAACTGTAATTGTCAAAAATAGCTTAGAAGGAGGTCCAGACCTGTTCCTTCACTGCAGATCTGCTGACAATGATCTTGGTATGCAACATCTTCATCCCAATTGGTCTTTTACATTTAGATTTCGAATTAACTTCTTTGGAACAACATTGTTCCATTGTTCTTTTCGATGGAAACATTTCTTGCACAAGTTTGTTATTTACGAAGCAAGTAGGGATGTCGAAACTTGTGATTTATGTAGTTGGGAAGTAAAAAGAGATGTACCATGTATGGTTTTTTCTCATAAAAGGAACTCAAGGGCCTTTCAAACCCTAATTACAATTAACAATAGTGATGAATAA 375 0.3467 MQPSTSSFLKPKTTVIVKNSLEGGPDLFLHCRSADNDLGMQHLHPNWSFTFRFRINFFGTTLFHCSFRWKHFLHKFVIYEASRDVETCDLCSWEVKRDVPCMVFSHKRNSRAFQTLITINNSDE* 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1042 124 PANTHER LEGUMINOSIN GROUP486 SECRETED PEPTIDE 6 106 - -
Pvu4g1042 124 Pfam Plant self-incompatibility protein S1 14 108 IPR010264 -
Pvu4g1042 124 PANTHER - 6 106 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1042 Pvu-Chr4 28225100 28225549 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g1042 5 121 Carbohydrate Esterase AT3G16970 39.669 5.84e-25 90.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1042 - - pvu:PHAVU_011G171900g 140.584