Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1035 ATGGACCCGAAGTTCATCGGAAAACCGCCGGCGACGCTGGACCTCGACCGCATGCCGGAGCGTGGGTCCCACCACCGCCGCTCCCACTCCGACACGTCGTTCCGCTTCGCCGCGAACTTCGACGACCTGCTCCTCTTCGACGCCTCCGACCTCGACATCTCCACGCTCCCCTCGCCGCTTCCTCTGCCTTCGCCGGGGGCCTCCGGCACGGTGCCGATACCGGTAGACTCCGACGAGTCCGGCGGAAGGCCGAGGCCGGCGGGGGCGCCCACCGGGGGACACCTGAGGAGTCTGTCGGTGGGCTCCGATTTCTTTGACGGGTACGGGTTCGGCGGCAGCGAGGAGAGGAGCGGCGGAGGGAAGGACGGCGGCGAGCGGAGGGTGGGGCACCACCGGCACAGCAACTCCATGGACGGGTCCTCGACGACGTCGTTTGAGGCGGACTCGGCGATGATGATAGATGGCGTGAAGAAAGCTATGGCTCCTGATAAACTCGCTGAACTCGCTCTTATTGATCCCAAGAGAGCTAAGAGGATTCTTGCTAACAGGCAGTCTGCTGCTAGATCAAAGGAGAGGAAGATTCGTTACACCAGTGAATTGGAGAGGAAGGTGCAGACACTTCAGACTGAAGCAACCAACCTTTCTGCACAGCTTACCATGCTTCAGAGAGACACCACAGATTTGACTTCAGAGAATAAGGAACTCAAACTGCGTCTAGAGGCTTTGGAGCAAGAAGCACAGCTTAGAGAAGATCTGAATGAGGCATTGAAGGAAGAACTGCAGCGCCTTAGGGCACAGAGTACTCGTTTGGGTGCTATGGCAGCAGGCAACCCTTCTTCTTTTGGTGGGATATTCAACCAGTTGGCTTCCCAGTTAGCGATGCAACAGTTGAGTAATTCTGCACCCCAGCAACCACAACACCAGCCACAAGTTGGCATGCCTCCTCCTCCCTCTGGACAGAACCACCCTAACTTCATGGACTTCAATCAGCAGAAGTAG 999 0.5796 MDPKFIGKPPATLDLDRMPERGSHHRRSHSDTSFRFAANFDDLLLFDASDLDISTLPSPLPLPSPGASGTVPIPVDSDESGGRPRPAGAPTGGHLRSLSVGSDFFDGYGFGGSEERSGGGKDGGERRVGHHRHSNSMDGSSTTSFEADSAMMIDGVKKAMAPDKLAELALIDPKRAKRILANRQSAARSKERKIRYTSELERKVQTLQTEATNLSAQLTMLQRDTTDLTSENKELKLRLEALEQEAQLREDLNEALKEELQRLRAQSTRLGAMAAGNPSSFGGIFNQLASQLAMQQLSNSAPQQPQHQPQVGMPPPPSGQNHPNFMDFNQQK* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1035 332 Coils Coil 197 273 - -
Pvu4g1035 332 MobiDBLite consensus disorder prediction 109 143 - -
Pvu4g1035 332 MobiDBLite consensus disorder prediction 295 332 - -
Pvu4g1035 332 MobiDBLite consensus disorder prediction 14 32 - -
Pvu4g1035 332 Pfam bZIP transcription factor 174 233 IPR004827 GO:0003700|GO:0006355
Pvu4g1035 332 Gene3D - 173 226 - -
Pvu4g1035 332 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 172 235 IPR004827 GO:0003700|GO:0006355
Pvu4g1035 332 PANTHER BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN-RELATED 10 329 - -
Pvu4g1035 332 CDD bZIP_plant_RF2 175 224 IPR044759 GO:0003700|GO:0006355
Pvu4g1035 332 MobiDBLite consensus disorder prediction 118 134 - -
Pvu4g1035 332 MobiDBLite consensus disorder prediction 54 97 - -
Pvu4g1035 332 MobiDBLite consensus disorder prediction 1 32 - -
Pvu4g1035 332 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 10 329 - -
Pvu4g1035 332 SUPERFAMILY Leucine zipper domain 174 229 IPR046347 GO:0003700|GO:0006355
Pvu4g1035 332 SMART brlzneu 170 234 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1035 Pvu-Chr4 27615332 27619366 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g1035 14 331 bZIP Transcription Factor Family AT1G43700 48.406 9.29e-76 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pvu4g1035 bZIP_1 2.1e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1035 K20557 - gmx:778142 477.633