Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1028 ATGTCATCAAATCAAACATCCCTCAACCAAGCCAAGTTTTCCCTTCCAAACAATGACCTTGAGCAACATGCAACAACTCTTGAGTTTGAAGCTGAGGACAACTTTGACTACTCGAAAAGATCTCAATGGCTGCGTGCTGCTGTGTTGGGAGCCAACGATGGATTGGTCTCAACAGCATCACTCATGATGGGTGTGGGGGCGGTGAAGCAAGACGTGAAGGCCATGATCCTATCAGGGTTTGCAGGGCTGGTGGCAGGAGCTTGCAGCATGGCCATAGGTGAGTTTGTGTCTGTGTACTCACAACTTGACATAGAGGTTGCCCAAATGAAGAGAGAGAAGGAAAGGATGCATGGTAGTGGCAGAGAAGGAGAAGGTATCAATGAAGAGAAAGAAGGTTTGCCAAATCCTTTACAGGCTGCAGTAGCCTCAGCTTTAGCTTTCTCTGTTGGTGCAATGGTTCCATTGCTTGCAGCAGCCTTCATAAGGGAATACAAGGTGAGGATTGGGGCGGTTCTGGCTGCTGTCACCTTTGCTTTGGTGGTGTTTGGTTGGTTAGGGGCTGTGTTGGGTAAGGCTCCAGTGTTGAGGTCTTCTGCAAGGATCTTGTTTGGGGGTTGGATGGCCATGTCAATTACTTTTGGTCTAACCAAGTTGATTGGTTCAATTGGACTCTAG 675 0.4815 MSSNQTSLNQAKFSLPNNDLEQHATTLEFEAEDNFDYSKRSQWLRAAVLGANDGLVSTASLMMGVGAVKQDVKAMILSGFAGLVAGACSMAIGEFVSVYSQLDIEVAQMKREKERMHGSGREGEGINEEKEGLPNPLQAAVASALAFSVGAMVPLLAAAFIREYKVRIGAVLAAVTFALVVFGWLGAVLGKAPVLRSSARILFGGWMAMSITFGLTKLIGSIGL* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1028 224 Pfam VIT family 122 216 IPR008217 GO:0005384|GO:0030026
Pvu4g1028 224 Pfam VIT family 44 117 IPR008217 GO:0005384|GO:0030026
Pvu4g1028 224 CDD Nodulin-21 42 193 - -
Pvu4g1028 224 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 16 221 IPR008217 GO:0005384|GO:0030026
Pvu4g1028 224 PANTHER VACUOLAR IRON TRANSPORTER HOMOLOG 1-RELATED 16 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1028 Pvu-Chr4 27416263 27416937 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g1028 17 224 Nodulin-like Gene Family AT3G43660 71.154 6.55e-102 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1028 K22736 - gmx:100807991 338.961
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g1028 4 27416263 27416937 Pvu7g0814 7 7508399 7509307 PCT