Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1021 ATGGACCACAGTGCCGATGCACATCGCACGGACTTGATGACCATAACGCGCTTCGTGTTGAACGAGCAATCCAAACACCCTGAGTCACGCGGTGATTTCACCATCCTTCTCAGTCACATTGTGCTTGGTTGCAAGTTCGTTTGCACCGCCGTTAACAAGGCTGGACTTGCGAAACTTATTGGACTCGCTGGAGAGACCAATATTCAGGGTGAAGAACAGAAGAAACTGGATGTTCTTTCCAATGAGGTTTTCATTAAGGCTCTCGTAAGCAGTGGCCGAACCTGTATCTTGGTTTCTGAAGAAAACGAAGACGCGATAATTGTGGAGCCTTCTAAGCGTGGAAAGTACTGTGTTGTTTTTGACCCCTTGGATGGCTCGTCAAACATTGATTGTGGGGTTTCCATTGGCACAATTTTTGGAATTTATACGTTAGCAGATGTCCATGAACCAACTGTAGAGGATGTCCTGCTTCCTGGGAAGAAAATGGTGGCAGCTGGTTATTGTATGTATGGAAGCTCTTGCACGCTTGTGTTAAGTACTGGAGCTGGTGTTAACGGTTTCACCCTTGACCCATCTCTTGGTGAATTCATCCTAACTCACCCTGACATTAAGATCCCTAACAAAGGAAAGATTTATTCAGTAAATGAAGGAAATGCCAAAAACTGGGATGGTCCTACTGCAGCTTACGTTGAAAAATGCAAGTTTCCAGAAGATGGTTCATCGCCAAAGTCTCTAAGATATATTGGAAGCATGGTAGCTGATGTTCATCGTACATTGCTTTACGGAGGCATCTTTTTGTACCCTGGTGATAAGAAAAATCCTAACGGAAAACTTCGTGTTCTGTATGAAGTCTTCCCAATGTCATTTTTGATGGAACAGGCAGGAGGACAGTCTTTCACGGGCAAGGAACGGGCACTTGATTTAGTTCCAACGAAGTTGCACGAGCGATCTCCCATTTTCCTTGGTAGCTATGATGAAGTTGAGGAAATCAAAGCGCTTTATGCTGCTGAGGGTGAAGAAGAATGA 1026 0.4464 MDHSADAHRTDLMTITRFVLNEQSKHPESRGDFTILLSHIVLGCKFVCTAVNKAGLAKLIGLAGETNIQGEEQKKLDVLSNEVFIKALVSSGRTCILVSEENEDAIIVEPSKRGKYCVVFDPLDGSSNIDCGVSIGTIFGIYTLADVHEPTVEDVLLPGKKMVAAGYCMYGSSCTLVLSTGAGVNGFTLDPSLGEFILTHPDIKIPNKGKIYSVNEGNAKNWDGPTAAYVEKCKFPEDGSSPKSLRYIGSMVADVHRTLLYGGIFLYPGDKKNPNGKLRVLYEVFPMSFLMEQAGGQSFTGKERALDLVPTKLHERSPIFLGSYDEVEEIKALYAAEGEEE* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1021 341 PIRSF FBPtase_SBPase 9 340 IPR000146 GO:0005975|GO:0016791
Pvu4g1021 341 ProSitePatterns Fructose-1-6-bisphosphatase active site. 276 288 IPR020548 GO:0005975|GO:0042578
Pvu4g1021 341 Gene3D - 4 203 - -
Pvu4g1021 341 PANTHER FRUCTOSE-1,6-BISPHOSPHATASE, CYTOSOLIC-LIKE 2 338 - -
Pvu4g1021 341 SUPERFAMILY Carbohydrate phosphatase 8 334 - -
Pvu4g1021 341 Hamap Fructose-1,6-bisphosphatase class 1 [fbp]. 13 336 IPR000146 GO:0005975|GO:0016791
Pvu4g1021 341 Pfam Fructose-1-6-bisphosphatase, N-terminal domain 13 201 IPR033391 -
Pvu4g1021 341 PANTHER FRUCTOSE-1,6-BISPHOSPHATASE-RELATED 2 338 IPR000146 GO:0005975|GO:0016791
Pvu4g1021 341 Pfam Fructose-1-6-bisphosphatase, C-terminal domain 205 334 IPR044015 -
Pvu4g1021 341 CDD FBPase 20 334 IPR000146 GO:0005975|GO:0016791
Pvu4g1021 341 PIRSF FBPtase 9 339 IPR028343 GO:0042132
Pvu4g1021 341 Gene3D - 204 341 - -
Pvu4g1021 341 PRINTS Fructose-1,6-bisphosphatase signature 38 65 IPR028343 GO:0042132
Pvu4g1021 341 PRINTS Fructose-1,6-bisphosphatase signature 75 101 IPR028343 GO:0042132
Pvu4g1021 341 PRINTS Fructose-1,6-bisphosphatase signature 155 178 IPR028343 GO:0042132
Pvu4g1021 341 PRINTS Fructose-1,6-bisphosphatase signature 186 209 IPR028343 GO:0042132
Pvu4g1021 341 PRINTS Fructose-1,6-bisphosphatase signature 212 239 IPR028343 GO:0042132
Pvu4g1021 341 PRINTS Fructose-1,6-bisphosphatase signature 310 335 IPR028343 GO:0042132
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1021 Pvu-Chr4 26898781 26905070 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1021 K03841 - gmx:100807451 652.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g1021 4 26898781 26905070 Pvu4g1021 4 26898781 26905070 ECH
Pvu4g1021 4 26898781 26905070 Pvu7g0818 7 7547769 7551938 PCT