Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1018 ATGGAAGGGAATTTGTCTCAGGGAGGTATGGTTCAAGGTGGGAGTTCTTTTAGTGGTTTTGATTTGCCTGGATCAATGAGGGTTAATCGGCAAGGGCATCATCCTCATTCCGTGAATCATCATCAAACTCATCCTTGCCAAGGGCCTTCAGTGCATTCCTCAGTTCAAGATGGTTTTCCTCTTACAATGGGAACCATGCAGAACTGCGATCAGACAATGTCAATGACTGAGTTTAGTCAGGGAGATAGAAACAAGAACTCACCAAGTGATGAAAGTTTTGCCGAGGAAGGTGTTGATGGTCATCATGAAGGAGTTAGAGGGAAAAAGGGGTCGCCTTGGCAGCGGGTGAAGTGGACTGATAAGATGGTGAGGCTTCTGATAACGGCTGTTTCTTACATAGGTGAGGATGCAACATCTGACTGTGGTGGCTCAAGGAGAAAATTTACAGTCCTACAGAAAAAGGGGAAGTGGAAATCGGTTTCCAAGGTCATGGCTGAAAGAGGTCATCGTGTTTCACCTCAGCAGTGTGAGGATAAATTCAATGATCTTAATAAAAGGTACAAAAAGCTTAATGATATGCTAGGCCGGGGAACTTCTTGTCAGGTTGTTGAGAGTCCTTCTCTATTGGATGTGATAGATTATCTTTCTGAGAAAGAAAAAGAGGAGGTTCGAAAAATATTGAGCTCAAAACACTTGTTTTATGAAGAGATGTGTTCTTACCATAATTGTAACAGGTTGCATTTACCTCATGATCTGGAATTGCAACGATCACTGCAGTTGGCTCATAGAAATAGAGATGATCATGACAATGATGATATCAGAAGGTCTCATCATGATGATCACGATGAAGATGATCTAGAAGTGGAAACTGATGATCATGATGACTTTGAGGACAATTATGCTACCCATGCAGATAGTAGAGGAGTCTATGGGGAAGTGGGGCGACCTATGAAGAGATTGAAACCAGGGCAAGGACAAGAAGATGCTGCCACTTTTGGCTGTGCTTTAAGCAGCCAAGAGTACAACAAAACTTCAAATCCTTATATGGTTCAATCTGATGTTAATCAAGCTGCACCTGAAAAAATGAGTGCAGCATGGTTACAGAAGCAATGGTTTGAATCTCGTTCACTTCAGTTAGAAGAGCAGAAGCTACAAATTCAGGTTGAGATGTTGGAGCTGGAGAAACAAAGATTCAAGTGGCAGAAGTTTAGTAAGAAAAAAGACCGGGAGTTGGAAAAGTTGAAGCTGGAGAATGAAAGAATGAAGCTTGAGAATGAACGTATTGCTTTAGAACTAAAACGAAAGGGAGTGGGTGCCGACTTTAACTAG 1329 0.4199 MEGNLSQGGMVQGGSSFSGFDLPGSMRVNRQGHHPHSVNHHQTHPCQGPSVHSSVQDGFPLTMGTMQNCDQTMSMTEFSQGDRNKNSPSDESFAEEGVDGHHEGVRGKKGSPWQRVKWTDKMVRLLITAVSYIGEDATSDCGGSRRKFTVLQKKGKWKSVSKVMAERGHRVSPQQCEDKFNDLNKRYKKLNDMLGRGTSCQVVESPSLLDVIDYLSEKEKEEVRKILSSKHLFYEEMCSYHNCNRLHLPHDLELQRSLQLAHRNRDDHDNDDIRRSHHDDHDEDDLEVETDDHDDFEDNYATHADSRGVYGEVGRPMKRLKPGQGQEDAATFGCALSSQEYNKTSNPYMVQSDVNQAAPEKMSAAWLQKQWFESRSLQLEEQKLQIQVEMLELEKQRFKWQKFSKKKDRELEKLKLENERMKLENERIALELKRKGVGADFN* 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1018 442 Coils Coil 374 396 - -
Pvu4g1018 442 MobiDBLite consensus disorder prediction 263 300 - -
Pvu4g1018 442 PANTHER F16F4.11 PROTEIN-RELATED 1 442 - -
Pvu4g1018 442 PANTHER FACTOR, PUTATIVE-RELATED 1 442 - -
Pvu4g1018 442 Pfam Myb/SANT-like DNA-binding domain 115 240 IPR044822 -
Pvu4g1018 442 MobiDBLite consensus disorder prediction 1 54 - -
Pvu4g1018 442 MobiDBLite consensus disorder prediction 88 111 - -
Pvu4g1018 442 Coils Coil 404 433 - -
Pvu4g1018 442 MobiDBLite consensus disorder prediction 263 283 - -
Pvu4g1018 442 Gene3D - 118 189 - -
Pvu4g1018 442 MobiDBLite consensus disorder prediction 76 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1018 Pvu-Chr4 26802474 26805894 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Pvu4g1018 Myb_DNA-bind_4 2.6e-23 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1018 - - mtr:MTR_6g035315 637.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g1018 4 26802474 26805894 Pvu4g1018 4 26802474 26805894 ECH
Pvu4g1018 4 26802474 26805894 Pvu7g0819 7 7564628 7571312 PCT