Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1005 ATGGAGATGAGAAGCAGTGAGGAGATAGAAATAGGAAGAGACATAACTCCAACACTCACTCCTCTCACTTTCTCTCTCCACGATTCCAATCTCAACACTCACTGCTCCGCCTGTTTCTCTCCTCTTTCCAGCCCTTCTCCCTCCATTCCCATTCCCAATCCCCTCATCTACTGCTCCCCTCCCTGCTCCGCCGCCCTTTCCCCCCTCCACCACGCCTCCGCCGAGACCCTCCTCCCTTCCTCCGCCCATTCCTCCCACCTCCGCGCCGCCCTCCGCCTCCTCCGCTCACACCGCCCCTCCCCCTCCTTTCGCCTCGCCGGCCTCCTCTCCAACCGCCGCATCCTCACCTCTCATCACCACGACCATGTCTCGGAGAGGATCAGGCTCGATGCCACCGTCATGGCCGAAGCCATCGCCGAGCAGCGCGCCGTTCCCCACGACGACGCCGTTTTGGAGGAAGCTACCATTGCGTTATGCGCTGTGCTAACGAACGCCGTGGAGGTGCACGATAACGAAGGGCGCGCCCTTGGAATTGCGGTTTTCGATCCCACCTTCTCTTGGATCAACCACAGCTGCTCCCCCAACGCATGCTACCGGTTCATCCTATCCTCTTTTCCTTCCAATGAACCTGAACTTCTTCGCATTGCTCCACATCCACAAATGGGTAGTGGTGGGGTTTGTGTTAGCAGTGATGAATTTGCCAAAGAGATGTTGGGTTATGGCCCTAGATTGGTTGTGAGGAGTATCAAGAAAATTAAAAAGGGAGAAGAGGTCACTGTAGCCTATACGGATATCTTGCAGACCAAGGCAACGAGACAGTGGGAGCTATGGTCAAAGTATAGGTTTGTTTGTTGTTGCAAACGATGTAGTGATCTTCCTTTGTCATACGTGGACCATGCATTGCAAGAAATTTCAGCTTTCAGTTATGATTCAACGAGTTCATATTCCATGTTCCTCAAAGACATGGCTGATAGAAGATTGACCGAGTGCATTGATGATGTCATATCAGAGTATCTTTCGGTTGGTGATCCTGAGTCTTGTCGTGACAAGCTTGAGAAGATACTCACGCAAGGTCTAAATGAGCAGTTAGAAGACATTAAAGAAAAATCAGATTCTAAATTCATGCTGCATCCCCTAAATCACCACTCTTTAACAGCGTACACAACACTGGCTTCAGCATATAAAGTTTGTGCTAGTGATTTATTGTCTGTAGATTCTGACATAGATATAAATCAGTTAAAGGCTTTTGACATGAGCAGGACCAGTGCTGCATATTCTCTGTTACTTGCAGGTGCAACTCATCATCTCTTCAATTCTGAATCCTCACTTATTGCATCAGTCGCAAATTTTTGGATAGGAGCTGGTGAATCTTTGTTATTCCTAAGCAGAAGTTCTGGATGGAGTATGCGTGTTAATTTGGGTCTGATGGTTCCAAACCTTGCTTCAGCCATTAAATTCAAATTGTCGAAGTGTTCATTAATTGATAGGATTAGAACCTGTATATCAAATGGTCAAATTAACAGTTCTGATTTTGAGAATGTATCAAGTGAATTTATTTATTATGTCTCTAATATTACACAGAAAGTTTGG 1590 0.4717 MEMRSSEEIEIGRDITPTLTPLTFSLHDSNLNTHCSACFSPLSSPSPSIPIPNPLIYCSPPCSAALSPLHHASAETLLPSSAHSSHLRAALRLLRSHRPSPSFRLAGLLSNRRILTSHHHDHVSERIRLDATVMAEAIAEQRAVPHDDAVLEEATIALCAVLTNAVEVHDNEGRALGIAVFDPTFSWINHSCSPNACYRFILSSFPSNEPELLRIAPHPQMGSGGVCVSSDEFAKEMLGYGPRLVVRSIKKIKKGEEVTVAYTDILQTKATRQWELWSKYRFVCCCKRCSDLPLSYVDHALQEISAFSYDSTSSYSMFLKDMADRRLTECIDDVISEYLSVGDPESCRDKLEKILTQGLNEQLEDIKEKSDSKFMLHPLNHHSLTAYTTLASAYKVCASDLLSVDSDIDINQLKAFDMSRTSAAYSLLLAGATHHLFNSESSLIASVANFWIGAGESLLFLSRSSGWSMRVNLGLMVPNLASAIKFKLSKCSLIDRIRTCISNGQINSSDFENVSSEFIYYVSNITQKVW 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1005 530 CDD SET_SMYD 142 289 - -
Pvu4g1005 530 Gene3D SET domain 6 289 IPR046341 -
Pvu4g1005 530 PANTHER PROTEIN SET DOMAIN GROUP 41 1 530 - -
Pvu4g1005 530 SUPERFAMILY SET domain 162 291 IPR046341 -
Pvu4g1005 530 Gene3D - 34 81 - -
Pvu4g1005 530 Gene3D - 82 165 - -
Pvu4g1005 530 Pfam SET domain 183 262 IPR001214 GO:0005515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Pvu4g1005 SET 6.9e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1005 - - pvu:PHAVU_004G094200g 989.564