LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pvu4g0991	GGTTATCGCATTGCTGGTGGGCCTTTGGGTGAGGTGACTGACCCAATCTACCCGGGTGGGAGCTTCGACCCATTGGGTCTTGCTGATGACCCAGAGGCTTTTGCTGAGTTGAAGGTTAAAGAGTTGAAGAATGGGAGATTGGCCATGTTCTCCATGTTTGGTTTCTTCGTTCAGGCCATTGTCACTGGAAAGGGACCTTTGGAGAACCTTGCAGATCACCTTGCTGACCCAGTCAACAACAATGCCTGGGCCTACGCCACCAACTTCGTCCCTGGAAAGTGA	282	0.5213	GYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK*	94

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pvu4g0991	93	Gene3D	Chlorophyll a/b binding protein domain	1	86	-	-
	Pvu4g0991	93	PANTHER	CHLOROPHYLL A/B BINDING PROTEIN	1	93	IPR001344	GO:0009765\|GO:0016020
	Pvu4g0991	93	SUPERFAMILY	Chlorophyll a-b binding protein	2	90	-	-
	Pvu4g0991	93	Pfam	Chlorophyll A-B binding protein	12	59	IPR022796	-
	Pvu4g0991	93	PANTHER	CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC	1	93	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Pvu4g0991	Pvu-Chr4	24985572	24986043	Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pvu4g0991	1	93	Chloroplast and Mitochondria Gene Families	AT2G34430	91.489	1.58e-56	173

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pvu4g0991	K08912		-	gmx:100796326	195.667

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