Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g0979 ATGGTAACCACAGTGAGACTTGTTTCACTGCTTCTCGTGAGCCTGGTAATTTACATAAGCGGCACCGCACAATGTTCCGTAACCAAACATTCAGACCCTAACCCTGCAGAGTTCGTGAAGTCATCGTGCAGGGCCACACGGTACCCTGTTTTATGCGTCCACTCGCTGTTGGCCTACGCAAGCGTCATACACCGAAGCGACCGGCAACTTGCGATGACAGCTTTGTCGGTGAGCATATCGAGGACTCGATCCTCGGGTTCGTTCCTGAAGAAGATGTCGAAAGCAAGAGGCATGAAGGTTAGGGAGCGGAGAGCGGTGCAGGATTGTGTGGAGACCATTGGTGACAGCGTGGAGCGTCTGAAGCAATCGTTTAAGGAGTTGGGGCGAACGGGGTTGGGAGAAGACTTCGCATGGCACATGAGCAATGTCCAGACCTGGGTTAGCGCCGCCCTAACCGACGACAGCACTTGTCTGGACGGCTTCGCTGGTTCCGCCATGAACGGAAACGTGAAGAGTGGTATAAAGGAGAGGGTTCTCCACGTTGCTCAAGTCACCAGCAATGCTCTCGCCTTGGTTAATCACTTTGCTTCCACCCACCCTACCCACTCTCCTTAA 615 0.5366 MVTTVRLVSLLLVSLVIYISGTAQCSVTKHSDPNPAEFVKSSCRATRYPVLCVHSLLAYASVIHRSDRQLAMTALSVSISRTRSSGSFLKKMSKARGMKVRERRAVQDCVETIGDSVERLKQSFKELGRTGLGEDFAWHMSNVQTWVSAALTDDSTCLDGFAGSAMNGNVKSGIKERVLHVAQVTSNALALVNHFASTHPTHSP* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g0979 204 PANTHER PECTINESTERASE INHIBITOR-LIKE 19 199 - -
Pvu4g0979 204 PANTHER PECTINESTERASE INHIBITOR 9 19 199 - -
Pvu4g0979 204 SMART PMEI_2 34 191 IPR006501 GO:0004857
Pvu4g0979 204 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 37 195 IPR035513 -
Pvu4g0979 204 TIGRFAM PME_inhib: pectinesterase inhibitor domain 8 194 IPR006501 GO:0004857
Pvu4g0979 204 CDD PMEI-like_3 41 197 - -
Pvu4g0979 204 Pfam Plant invertase/pectin methylesterase inhibitor 38 191 IPR006501 GO:0004857
Pvu4g0979 204 Gene3D Invertase/pectin methylesterase inhibitor family protein 35 195 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g0979 Pvu-Chr4 24384489 24385510 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g0979 20 198 Carbohydrate Esterase AT3G14310 27.222 2.32e-22 92.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g0979 - - gmx:100776636 277.33