Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g0976 ATGGCTGCTTCCACAATGGCTCTCTCTTCACCGTCACTGGCAGGCCAAGCCATCAAGCTTTCCCCTGCCACCCCCGACATCTCTGGTGGAAGGATTTCCATGAGGAAGACAGCCTCCAAGTCGGTTTCTTCTGGAAGCCCATGGTACGGCCCAGATCGCGTCAAGTACTTGGGCCCATTCTCCGGTGAGGCCCCTTCCTACCTCACTGGCCAATTCCCAGGTGACTACGGCTGGGACACTGCTGGCCTTTCTGCTGACCCAGAGACTTTTGCCAAAAACCGTGAACTGGAAGTCATTCACTCCAGATGGGCTATGTTGGGAGCTTTGGGTTGTGTGTTCCCAGAACTCTTGGCCCGCAACGGTGTGAAGTTCGGAGAGGCCGTGTGGTTCAAGGCTGGGTCTCAGATATTCAGTGAGGGTGGGCTTGACTACTTGGGCAACCCAAGCTTAGTCCATGCACAGAGCATCCTTGCCATCTGGGCCACACAGGTGATCTTGATGGGTGCAGTGGAGGGTTATCGCATTGCTGGTGGGCCTTTGGGTGAGGTGACTGACCCAATCTACCCGGGTGGGAGCTTCGACCCATTGGGCCTTGCTGATGACCCAGAGGCCTTTGCTGAGTTGAAGGTTAAAGAGTTGAAGAATGGGAGATTGGCCATGTTCTCCATGTTTGGTTTCTTCGTTCAAGCCATTGTCACTGGAAAGGGACCTTTGGAAAACCTTGCAGATCACCTTGCTGACCCAGTCAACAACAATGCCTGGGCCTATGCCACCAACTTTGTTCCTGGAAAGTGA 795 0.5421 MAASTMALSSPSLAGQAIKLSPATPDISGGRISMRKTASKSVSSGSPWYGPDRVKYLGPFSGEAPSYLTGQFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g0976 264 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 2, CHLOROPLASTIC 1 264 - -
Pvu4g0976 264 Gene3D Chlorophyll a/b binding protein domain 55 257 - -
Pvu4g0976 264 SUPERFAMILY Chlorophyll a-b binding protein 47 261 - -
Pvu4g0976 264 Pfam Chlorophyll A-B binding protein 64 230 IPR022796 -
Pvu4g0976 264 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 264 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g0976 Pvu-Chr4 24039458 24040673 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g0976 1 264 Chloroplast and Mitochondria Gene Families AT1G29930 88.015 1.37e-172 475
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g0976 K08912 - ccaj:109815895 525.398