Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g0916 ATGTTCCTCAAAATTCAATTTTTGTTCCTCACCCTTTTTCTGGCAGCCACCGTTGCTACCGCCATAGACCCAGGTTCCACTCTTTCGGCCTCTTCCACCTCCAACCAAACGTGGTCTTCTCCCAGTGGCACCTTCTCCCTCAGATTCATCTCCGTTCAGCCTCCCACCACCCCTCCTTCCTTCATCGCCGCCATCGTTTACACCGGCGGCAACCCTGTTGTCTGGTCCGCTGGCAACGGCACCGCAGTCGACTCCGGCGGCTCCTTACGGTTCCTCTCCTCCGGCTCCCTCCGCCTCGTCAATGGCTCCGGCGCCACCGTGTGGGACTCTGGAACGGCGGGCGCCACTTCAGCAGCCCTTGAGGAGAGTGGCAAATTGGTAATTTCAAACGGCACTAGCCCCCTCTGGTCAAGCTTTGACAACCCCACTGATACCCTGGTGCCCTCTCAGAATTTCAGTGTTGGTAAGGTTCTCACTTCTGAAAGTTATGTTTTTAGCCTTAATGGAATTGGGAATTTGTCTCTGAAGTGGAACAGTAGCATAGTGTACTGGACCCAGGGTTTGAATTCCTCTGTGAATGTGAGTTTAGAGTCCCCTGTGTTGACTTTGACATCAATTGGGCTTTTGGAACTTTCTGATGTGAAATTGAGTTCTCCTGTTCTTGTTGCCTATAGTAGTGACTATGATCTGAATGCTGATGTGTTTAGGGTTTTGAAGTTGGATAATGATGGGAATTTGAGGATTTATAGTACTAATAAGGGTGGTGGAACTTCTACTGTTAGATGGGCTGCTGTTGCAGATCAATGTAAGGTTTATGCTTACTGTGGGAACTATGGTGTGTGTAGTTACAATGATTCCAGCACGGTATGTGGTTGCCCTTCAGAGAATTTTGAGATGGTTGATCCCAATGATGGTAGGAAAGGGTGTAAGAGGAAGGCGAGTCTTGATAGTTGTCAAGGGAGCGCAACCATGTTGACCTTGGATCATGCTGTGGTGTTGAGTTATCTCCCTGAGGCTTCATCGGAGACGTTTTTCATTGGTTTATCAGCGTGTAGAACGAATTGTCTTTCGGGTTCAACAGCATGTTTTGCCTCTACTTCCTTGTCAGATGGCACAGGGCAGTGTGTAATAAGATCAGTAGATTTTGTTAGTGGATATCAGGATCCTTCGCTGCCTGGCACTTCTTATTTCAAGGTTTGTCCGCCGTTGGCTCCAAATCCACCATCCTCTTCAGCAGAGACTGTGAGGGAAAGGGGGTCCAAGGTGCCTGCATGGGTTGTGGTGGTGGTTGTTTTGGGTACCCTTTTGGGTTTGGTAGCCTTGGAAGGGGGTTTGTGGATGTGGTGTTGTAGGAATAACAAGAGGTTTGGTGGGTTGTCAGCTCAGTATGCTCTTCTTGAGTATGCTTCTGGTGCTCCAGTGCAGTTCTCGTACAAGGAGCTCCAGCAAGCGACCAAGGGGTTCAAGGAGAAGCTTGGAGCTGGTGGATTTGGTGCTGTTTATAGAGGCACTCTTGTTAATAAAACTGTTGTTGCAGTGAAGCAACTTGAGGGCATTGAGCAAGGTGAGAAGCAGTTTCGGATGGAAGTTGCCACTATAAGTAGCACTCATCATCTGAATTTGGTGAGGCTCATTGGGTTTTGCTCAGAAGGGCGCCACCGGCTTCTGGTTTATGAGTTCATGAAAAATGGATCTCTTGATAATTTTCTATTTCTGACAGAACAGCATTCAGGAAAATTGTTGAATTGGGATTACCGATACAACATTGCGCTGGGCACAGCAAGAGGCATCACATACCTTCACGAGGAGTGCCGTGACTGCATAGTCCATTGTGACATAAAACCTGAAAACATTCTCTTGGATGAGAATTATGTTTCCAAAGTCTCTGATTTTGGTCTGGCAAAGCTTATTAATCCTAAGGACCATAGGCATCGGACCTTAACAAGTGTGAGAGGAACCAGAGGATACTTAGCTCCCGAGTGGCTTGCAAATCTTCCAATAACATCCAAATCTGATGTTTACAGCTATGGTATGGTTTTGTTGGAGATTGTGAGTGGAAGGAGGAATTTTGATGTTTCAGAGGAAACAAACAGGAAGAAGTTCTCGATTTGGGCCTATGAAGAGTTTGAGAAAGGTAACATCAGTGAAATTTTGGACAAAAGACTAGCTCGGCAAGAAGTTGATATGGAGCAAGTAAGAAGGGCAATTCAGGCAAGCTTTTGGTGCATCCAGGAGCAGCCATCTCAGAGACCAACAATGAGCAGAGTGCTGCAAATGCTAGAAGGGGTAACTCAGTTTGAAAAGCCACCTGCCCCAAAATCAGTAGTGATGGAAGGAACTGTTAGTGGAACAAGCACATACCTGAGTAGCAATGCCAGTGCATTCTCCACGGTTGGAGTTTCACCCCCTGGACCCTCCTCTACATCATCATTTCAGATTAGTAATAATGTTTCAACCTTCAACTCAGAAAGGAACCCTGAGAAGCCAACCTCGACCCTTTTACAATCAGACACATGA 2517 0.4688 MFLKIQFLFLTLFLAATVATAIDPGSTLSASSTSNQTWSSPSGTFSLRFISVQPPTTPPSFIAAIVYTGGNPVVWSAGNGTAVDSGGSLRFLSSGSLRLVNGSGATVWDSGTAGATSAALEESGKLVISNGTSPLWSSFDNPTDTLVPSQNFSVGKVLTSESYVFSLNGIGNLSLKWNSSIVYWTQGLNSSVNVSLESPVLTLTSIGLLELSDVKLSSPVLVAYSSDYDLNADVFRVLKLDNDGNLRIYSTNKGGGTSTVRWAAVADQCKVYAYCGNYGVCSYNDSSTVCGCPSENFEMVDPNDGRKGCKRKASLDSCQGSATMLTLDHAVVLSYLPEASSETFFIGLSACRTNCLSGSTACFASTSLSDGTGQCVIRSVDFVSGYQDPSLPGTSYFKVCPPLAPNPPSSSAETVRERGSKVPAWVVVVVVLGTLLGLVALEGGLWMWCCRNNKRFGGLSAQYALLEYASGAPVQFSYKELQQATKGFKEKLGAGGFGAVYRGTLVNKTVVAVKQLEGIEQGEKQFRMEVATISSTHHLNLVRLIGFCSEGRHRLLVYEFMKNGSLDNFLFLTEQHSGKLLNWDYRYNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYVSKVSDFGLAKLINPKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFDVSEETNRKKFSIWAYEEFEKGNISEILDKRLARQEVDMEQVRRAIQASFWCIQEQPSQRPTMSRVLQMLEGVTQFEKPPAPKSVVMEGTVSGTSTYLSSNASAFSTVGVSPPGPSSTSSFQISNNVSTFNSERNPEKPTSTLLQSDT* 839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g0916 838 Pfam D-mannose binding lectin 73 166 IPR001480 -
Pvu4g0916 838 Gene3D Phosphorylase Kinase; domain 1 458 560 - -
Pvu4g0916 838 CDD B_lectin 29 142 IPR001480 -
Pvu4g0916 838 SMART blect_4 29 142 IPR001480 -
Pvu4g0916 838 CDD STKc_IRAK 492 762 - -
Pvu4g0916 838 Gene3D Transferase(Phosphotransferase) domain 1 561 774 - -
Pvu4g0916 838 Gene3D - 17 140 IPR036426 -
Pvu4g0916 838 SUPERFAMILY alpha-D-mannose-specific plant lectins 72 188 IPR036426 -
Pvu4g0916 838 Pfam Protein kinase domain 489 758 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu4g0916 838 Pfam S-locus glycoprotein domain 231 293 IPR000858 GO:0048544
Pvu4g0916 838 Gene3D - 141 264 IPR036426 -
Pvu4g0916 838 ProSitePatterns Protein kinases ATP-binding region signature. 492 514 IPR017441 GO:0005524
Pvu4g0916 838 MobiDBLite consensus disorder prediction 797 838 - -
Pvu4g0916 838 PANTHER G-TYPE LECTIN S-RECEPTOR SERINE/THREONINE-PROTEIN KINASE 8 821 - -
Pvu4g0916 838 ProSiteProfiles Bulb-type lectin domain profile. 19 141 IPR001480 -
Pvu4g0916 838 ProSiteProfiles Protein kinase domain profile. 486 763 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu4g0916 838 ProSiteProfiles Bulb-type lectin domain profile. 143 261 IPR001480 -
Pvu4g0916 838 SMART serkin_6 486 760 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu4g0916 838 SUPERFAMILY Protein kinase-like (PK-like) 469 761 IPR011009 -
Pvu4g0916 838 PANTHER OS07G0415500 PROTEIN 8 821 - -
Pvu4g0916 838 ProSitePatterns Serine/Threonine protein kinases active-site signature. 608 620 IPR008271 GO:0004672|GO:0006468
Pvu4g0916 838 PIRSF SRK 1 821 IPR024171 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g0916 Pvu-Chr4 17686836 17689352 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g0916 459 770 Receptor kinase-like Gene Family AT5G20050 44.615 4.98e-81 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pvu4g0916 Pkinase 3.3e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g0916 - - gmx:100795819 1380.54