Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g0911 ATGTTTTCAAAGTGGTTGGTCGTGGTGGTGGATGCGGTTGTTTTGATGGTGGTTTGTCGTGGTATGAAGGAACTATTTAGATGCCAAATAACAGTCCACCAAGAGTGCTATGGGGCAAAACATGTCAAGTATTTAAATTCTTGGGTTAGCAGAGTATGTGAAACTTTTGATGTTGAGAGAAAGTGTTGCCTTTTCCTAGTAAAAGGTGGTGCTTTAAAGCCAACTAATGTTGAAATGTTGTGGGTTCATGTAATATGTGCTTGGTTTCGATCTCAAGTTGTTTTCCAAAACCATGAGGTCGTGAAACCTGCTGTAGGAATCCTTAAAATTTATCCTAATTCATTTGTGAAGACTTGTGTGATTTGTAAACAGAGTCGTGGTTCATGTATAACTTGTTACAAGTGTGCTACATATTTTCATGTGATGTATGCATCAAGCGTCAGATACATATGA 453 0.3797 MFSKWLVVVVDAVVLMVVCRGMKELFRCQITVHQECYGAKHVKYLNSWVSRVCETFDVERKCCLFLVKGGALKPTNVEMLWVHVICAWFRSQVVFQNHEVVKPAVGILKIYPNSFVKTCVICKQSRGSCITCYKCATYFHVMYASSVRYI* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g0911 150 Pfam PHD-zinc-finger like domain 61 146 - -
Pvu4g0911 150 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 56 149 IPR013083 -
Pvu4g0911 150 ProSiteProfiles Extended PHD (ePHD) domain profile. 59 150 IPR034732 -
Pvu4g0911 150 PANTHER PHD FINGER PROTEINS 16 149 - -
Pvu4g0911 150 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ATX3 16 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g0911 Pvu-Chr4 16714782 16716371 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g0911 11 141 C2H2 Transcription Factor Family AT3G14740 33.333 1.04e-13 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g0911 - - pvu:PHAVU_004G085300g 314.309