Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g0905 ATGGAAGATTCAGAGGGAGAAGAGCTTCTAAATCTTACTCTTTCGGTTGCTGCAGGTAGGGAGAGGAAAAAGAAAGAAAGGACAAGGGATGATAATACTAATTCTCTTGTTATTCCTATGAAGTCCCGTGAAGGGTATGAAGGGAAGATCTTTAGGCTCCTCCAAATGAGGGAGCTAATGCTAAGAGAAGATCACAGAAGAAAAGGAGTAGTTGAAGATGTGAATAATGGCCTTCCTTTGATTCATTTGCTTCTTTCAACTGCCACTTCTATTGATGAGAGAAACTACTGTGCAACTCTAGAGAATCTCATTGAGTTGTACCAAACAGTTTCCCTAATAGGTGATTCAGTTCAACGTGTGGTTGCCTATTTTGCTGACGGTTTGGCTGCAAGGCTTCTCACAAGAAAGTCCCCTTTCTATGACATGGTCATGGAGGAACCAACAAGTGAGGAAGAGTTTCTTGCATTCACAGATCTCTATAGAGTCTCACCCTATTACCAATTTGCTCACTTCACAGCAAACCAGGCTATTTTGGAGGCATACGAGGAGGAGGAAGAGAGGAACAACAAATCACTTCATGTCATTGATTTTGATGTCTCCTATGGCTTCCAATGGCCTTCTCTCATTCAATCACTTTCTGAAAAGGCAACCAGTAGCAACAGAATATCCCTCAGGATAACAGGTTTTGGGAACAACCTGAAAGAACTGCAAGAAACTGAGGCCAGGTTAGTTAGTTTCTCCAAGGGGTTTAGTAACCACCTAGTGTTTGAATTCCAAGGGCTGTTAAGAGGCTCATCAAGGCTCATCAACCTAAGGAAAAGGAAAAATGAAACTTTGGCAGTGAACCTTGTTTCTTACTTGAACACTTTGACTAGTTTCATGAAGGTCTCGGACACATTAGAACTTGTTCATTCTCTTAGCCCCTCCATTGTGGTGTTGGTGAAACAAGAAGGTAGCAGGAATTTGAAGACCTTCTTGTCAAGGTTCACTGAGTCTTTGCACTATTTTGCAGCCATGTTCGATTCACTAGATGATTGCTTGCCACTTGAGAGCACTGAGAGATTGAGGATTGAGAAGAAGCTTTTGGGGAAAGAGATCAAAAGCATGCTCAACTATGACATGGATGGTGTGGATTGCCCAAAGTATGAGAGGATGGAAACATGGAAAACAAGAATGGAGAATCATGGATTTGTGGGAAGAAAAATTAGCTCAAAGTGTGTGATCCAAGCAAAGCTGCTTCTGAAGATGAGGACCCATTATTATCCCCTACAGTTTGAGGAAGAGGGTGGAAGTGGAGGTTTCAGAGTTTCTGAAAGGGATGAAGGAAGAGTTATCTCTTTGGGATGGCAAAATAGGTTTCTTCTCACAGTCTCAGCATGGCAACCAATTTGA 1392 0.421 MEDSEGEELLNLTLSVAAGRERKKKERTRDDNTNSLVIPMKSREGYEGKIFRLLQMRELMLREDHRRKGVVEDVNNGLPLIHLLLSTATSIDERNYCATLENLIELYQTVSLIGDSVQRVVAYFADGLAARLLTRKSPFYDMVMEEPTSEEEFLAFTDLYRVSPYYQFAHFTANQAILEAYEEEEERNNKSLHVIDFDVSYGFQWPSLIQSLSEKATSSNRISLRITGFGNNLKELQETEARLVSFSKGFSNHLVFEFQGLLRGSSRLINLRKRKNETLAVNLVSYLNTLTSFMKVSDTLELVHSLSPSIVVLVKQEGSRNLKTFLSRFTESLHYFAAMFDSLDDCLPLESTERLRIEKKLLGKEIKSMLNYDMDGVDCPKYERMETWKTRMENHGFVGRKISSKCVIQAKLLLKMRTHYYPLQFEEEGGSGGFRVSERDEGRVISLGWQNRFLLTVSAWQPI* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g0905 463 PANTHER OSJNBA0084A10.13 PROTEIN 8 461 - -
Pvu4g0905 463 ProSiteProfiles GRAS family profile. 71 461 IPR005202 -
Pvu4g0905 463 Pfam GRAS domain family 80 461 IPR005202 -
Pvu4g0905 463 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 8 461 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g0905 Pvu-Chr4 15408089 15409480 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g0905 66 461 GRAS Transcription Factor Family AT1G14920 33.007 7.15e-54 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pvu4g0905 GRAS 7.3e-89 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g0905 - - gmx:100778791 774.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g0905 4 15408089 15409480 Pvu4g0905 4 15408089 15409480 ECH
Pvu4g0905 4 15408089 15409480 Pvu7g0930 7 9184617 9186002 PCT