Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g0884 ATGGAAATTAGCATCACATCAAGAGAAACCATTAAACCATCACTGCCCACTTCTGCAGAATGCAAAACCCAAAAATTATGCTTGTTTGATGTGTTTCAACTCAACACCTATTTTCCATTAATCCTTTTTTACAGTAAAACCTCCAACCTTGAAGGATTCTCAGATGTCTCAACTCAGTTGAAGAAATCACTATCTGAGGCACTAACCATCTTCTACCCTCTTGGAGGTAGAAGATGTGATTACTTTTCCATTGATTGCAACGATGAAGGTGCAATTTACATGGAAGCTTCAGTGAATACCAACATGGAAGTGTTCTTAAAACCACCCAAATTAGAACTGCTAAACCAGCTACTTCCATGTGAGCCTAACAAGTGCCATCCTCACCAAGAAGTGTTGCCCCAATTACTTGTTCAAGTAAACATTTTCCAATGTGGAGGAATAGCTATTGGCTTGTGCAACCTCCACATTCTCTTGGATGCATATTCTTGCAGTGCCTTCTTGAAAACCTGGTTTGCCATTTGCAAAGGGTCAAAGGAAGAAATATCATGGCCAAATTTCTATTCTGCTTCTTCTTCCTTCCCTCCAAGGAACACCACTGGTGTACGTGCTGGCATGTTAAATATAAACAAAGACTTGAATATAGAAGAAACCTGCACTACAAGAAGATTCTTATTTGATCACAAAGCCATCAATGAGCTGAAATCCATGTCAACAAGTGATGAAACAAAACCTACACGATACCAAGTAGTGTCTTCATTCATAAGTAAACATATGATTGTATCAATCAAAGAGGAATGTTGTTGTGACAAAACAAGACCAATGGTTGCTTTACATGTTGTGGACATGAGAAAAAGGATGGGGGAGCCTTTCTCAAAAGGTGCTATTGGAAATTTGTTGTGGCCTGCATTGGTTGTTCTTGAGGATGTCAACAAGAACAGTGATATTATAGATTTGGTTAAGGTTGTAAAAGAAGGAGTTGGACAACTCACAAAGGAATTGTTTCAAAAACTAGAGAATGATCCTAATTTTTTGTGGAGTGATGAATGTGCAGAACTAATGCTTGAAGGCATAGAAGCAAATAAGCCAATCTCGTTAGTGTTCACAAGTTGGGCTAATATGGGATTCAAGGAGATGGATTTTGGCAGTGGAAAACCTTTGTGGCTAGCTCAAAGAGGAGGTACTAAACAAAGTATTCCAAACACAGTAATATTGATGGAAACAAGAGAGGGAATAGAGGCATGGATCACAATGAGAGAGACACATATAACTATCTTGGAACATGATGTGGACTTTCTTCTATTTGCATTGCCTAATCCTAGTATTTTAATCTAA 1332 0.3829 MEISITSRETIKPSLPTSAECKTQKLCLFDVFQLNTYFPLILFYSKTSNLEGFSDVSTQLKKSLSEALTIFYPLGGRRCDYFSIDCNDEGAIYMEASVNTNMEVFLKPPKLELLNQLLPCEPNKCHPHQEVLPQLLVQVNIFQCGGIAIGLCNLHILLDAYSCSAFLKTWFAICKGSKEEISWPNFYSASSSFPPRNTTGVRAGMLNINKDLNIEETCTTRRFLFDHKAINELKSMSTSDETKPTRYQVVSSFISKHMIVSIKEECCCDKTRPMVALHVVDMRKRMGEPFSKGAIGNLLWPALVVLEDVNKNSDIIDLVKVVKEGVGQLTKELFQKLENDPNFLWSDECAELMLEGIEANKPISLVFTSWANMGFKEMDFGSGKPLWLAQRGGTKQSIPNTVILMETREGIEAWITMRETHITILEHDVDFLLFALPNPSILI* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g0884 443 Gene3D - 215 433 IPR023213 -
Pvu4g0884 443 PANTHER F21J9.9 1 441 - -
Pvu4g0884 443 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 1 441 - -
Pvu4g0884 443 Gene3D - 1 202 IPR023213 -
Pvu4g0884 443 Pfam Transferase family 1 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g0884 Pvu-Chr4 14661153 14662484 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g0884 39 426 Monolignol Biosynthesis Gene Families AT5G48930 23.284 5.53e-18 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g0884 - - gmx:102667966 734.947