Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pvu4g0882 | ATGGCTAAGCATGATGTTGAGGGTGGTTCCTTCTCTGCAAAGGACTACCATGACCCTCCTCCAGCACCCTTGATTGATGCTCAGGAACTCACACAGTGGTCCTTCTACAGGGCCTTGATTGCTGAGTTCATTGCCACACTGCTCTTCCTTTACATCACAGTGCTCACTGTCATTGGCTACAAGAGCCAGAGTGATGCCAAGGCTGGGGGTGATCTCTGTGGTGGGGTTGGCATTCTTGGCATTGCTTGGGCCTTCGGTGGCATGATCTTCATCCTTGTTTACTGCACTGCTGGAATCTCAGGAGGTCACATAAACCCAGCAGTGACTTTTGGACTCTTCTTGGCTCGGAAGGTGTCTTTGATAAGGGCTATAATGTACATGGTGGCTCAGTGCTTGGGGGCCATATGTGGAGTTGGGTTGGTTAAGGCCTTCCAAAAGGCTTACTACACCAGGTATGGTGGTGGGGCCAATGAGCTCAGTGAAGGGTACAGCACAGGTGTTGGATTGGGTGCTGAGATCATTGGAACCTTCGTTTTGGTGTACACTGTCTTCTCTGCTACCGACCCCAAGAGGAATGCTAGAGATTCTCATGTACCGGTTTTGGCTCCACTGCCAATTGGGTTTGCTGTGTTCATGGTTCACTTGGCAACCATCCCAGTGACTGGCACTGGTATTAACCCTGCTAGAAGTCTTGGAGCTGCTGTCATATACAACAAAGAGAAGGCCTGGGATGACCAATGGATCTTTTGGGTTGGACCATTCATTGGAGCAGCCATTGCAGCCTTCTACCACCAATTCATCTTGAGAGCAGGTGCTGCTAAGGCTCTTGGATCATTCAGGAGCAACCCCACTATTTGA | 858 | 0.5012 | MAKHDVEGGSFSAKDYHDPPPAPLIDAQELTQWSFYRALIAEFIATLLFLYITVLTVIGYKSQSDAKAGGDLCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLIRAIMYMVAQCLGAICGVGLVKAFQKAYYTRYGGGANELSEGYSTGVGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVIYNKEKAWDDQWIFWVGPFIGAAIAAFYHQFILRAGAAKALGSFRSNPTI* | 286 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pvu4g0882 | 285 | PRINTS | Major intrinsic protein family signature | 37 | 56 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Pvu4g0882 | 285 | PRINTS | Major intrinsic protein family signature | 85 | 109 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Pvu4g0882 | 285 | PRINTS | Major intrinsic protein family signature | 122 | 141 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Pvu4g0882 | 285 | PRINTS | Major intrinsic protein family signature | 171 | 189 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Pvu4g0882 | 285 | PRINTS | Major intrinsic protein family signature | 207 | 229 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Pvu4g0882 | 285 | PRINTS | Major intrinsic protein family signature | 247 | 267 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Pvu4g0882 | 285 | PANTHER | AQUAPORIN OR AQUAGLYCEROPORIN RELATED | 11 | 282 | IPR034294 | - | |
Pvu4g0882 | 285 | TIGRFAM | MIP: MIP family channel proteins | 41 | 264 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Pvu4g0882 | 285 | PANTHER | PLASMAMEMBRANE INTRINSIC PROTEIN 25 | 11 | 282 | - | - | |
Pvu4g0882 | 285 | CDD | MIP | 37 | 267 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Pvu4g0882 | 285 | Gene3D | Glycerol uptake facilitator protein. | 22 | 285 | IPR023271 | - | |
Pvu4g0882 | 285 | Pfam | Major intrinsic protein | 29 | 264 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Pvu4g0882 | 285 | ProSitePatterns | MIP family signature. | 103 | 111 | IPR022357 | - | |
Pvu4g0882 | 285 | SUPERFAMILY | Aquaporin-like | 28 | 269 | IPR023271 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pvu4g0882 | Pvu-Chr4 | 14570403 | 14574323 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pvu4g0882 | 1 | 281 | Major Intrinsic Protein MIP | AT2G37170 | 85.106 | 7.46e-178 | 491 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pvu4g0882 | K09872 | - | gmx:547857 | 560.451 |