Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g0878 ATGGAGGAGCAACCCAAACTTGAACCTAGTCCTCTCCGAAAAATGGTGGCGGTTTCTTCCATCGCCGCCGGTGTACAATTTGGGTGGGCCTTGCAACTCTCCCTTCTAACTCCATATGTACAAACCCTAGGAGTTCCTCACGCCTGGGCCTCCTTCATTTGGCTCTGTGGCCCCATCTCCGGCCTCTTAGTTCAGCCCATTGTAGGCTACAGCAGTGACCGATGCCAATCTCCTTTTGGACGCCGCCGTCCCTTTATCCTCACCGGCTCGCTCGCCGTCGCCGTCGCCATTATCCTAATTGGCTACGCTGCCGATATAGGACAACTAGCTGGCGATGACATCACCCAGAAAACCCGTCCACGTGCCGTTGCCATCTTCGTTGTTGGCTTCTGGATCTTAGATGTTGCCAACAACATGCTCCAGGGTCCATGCCGCGCCTTCCTCGGTGACTTGGCTGCCGGCGACCAGAAAAAGACGAGAACCGCCAACGGCTTCTTCTCGTTTTTCATGGCTGTCGGCAACGTCTTGGGCTATGCCGCAGGATCCTACGACGGTCTCCATAAGATTTTCCCTTTCACAGAAACCGAGGCATGCAACGTCTTCTGCGCAAACCTAAAGAGCTGCTTCTTCTTCTCCATCGTTCTTCTTCTTTCTTTGTGCAGTATCGTTCTCACTTGCGTGAACGACCCTCAGTACATACCCTCAAAACAGGAGGAGGCTGAGGATGAAGGGAAGACGCACTTTTCGTGCTTCTTGGGAGAGTTGTGCGTTGCATTCAAGGGACTGCAGAAGCCAATGTGGATGCTGATGCTGGTGACCGCTATTAACTGGCTTGCGTGGTTCCCTTATGTGTTGTTCGACACTGACTGGATGGGTCGTGAGGTGTATGGTGGTGATGTTGGGCAGAAGGCATATGATGCTGGTGTTCATGCTGGTTCTTTGGGACTCATGTTGAACTCAGTGGTGCTCGCTGTGATGTCTTTGGGTGTTGAACCGTTGGGTCGCTTGGTTGGAGTCAAGTGGTTGTGGGCAATGGTTAATGTTATTCTTGCAGCTTGCTTGGCATTGACCGTGCTCATCACAAAAATCGCTGAGCAGCAACGAGCACTTAACCCTGCTCTCATTGGAGACCCCTCCATGGATGTGAAAGGTGGAGCCATGGCATTCTTCTCCGTCCTTGGTATTCCTCTTGCGGTTACGTACAGTGTTCCCTTTGCTCTAGCATCTATCTACTCCAGCAGCTCAGGAGCAGGACAAGGTTTATCTTTGGGTCTTCTCAATGTAGCAATTGTGATCCCTCAGATGATTATATCGGCAATTAGTGGACCATGGGATGCTTGGTTCGGTGGTGGCAACTTGCCGGCGTTCGTGTTGGGCGCAGTGGCGGCCGCCGTCAGTGCCATACTAGCAGTTGTTCTGCTTCCAACCCCTAAGAAAGAGGATGAAGCAAAGATTTCCAGCCTCTCCATGGGGAGTTTCCATTAG 1485 0.5219 MEEQPKLEPSPLRKMVAVSSIAAGVQFGWALQLSLLTPYVQTLGVPHAWASFIWLCGPISGLLVQPIVGYSSDRCQSPFGRRRPFILTGSLAVAVAIILIGYAADIGQLAGDDITQKTRPRAVAIFVVGFWILDVANNMLQGPCRAFLGDLAAGDQKKTRTANGFFSFFMAVGNVLGYAAGSYDGLHKIFPFTETEACNVFCANLKSCFFFSIVLLLSLCSIVLTCVNDPQYIPSKQEEAEDEGKTHFSCFLGELCVAFKGLQKPMWMLMLVTAINWLAWFPYVLFDTDWMGREVYGGDVGQKAYDAGVHAGSLGLMLNSVVLAVMSLGVEPLGRLVGVKWLWAMVNVILAACLALTVLITKIAEQQRALNPALIGDPSMDVKGGAMAFFSVLGIPLAVTYSVPFALASIYSSSSGAGQGLSLGLLNVAIVIPQMIISAISGPWDAWFGGGNLPAFVLGAVAAAVSAILAVVLLPTPKKEDEAKISSLSMGSFH* 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g0878 494 PANTHER SUGAR TRANSPORTER 3 482 - -
Pvu4g0878 494 TIGRFAM GPH_sucrose: sucrose/H+ symporter 11 479 IPR005989 GO:0005887|GO:0008515|GO:0015770
Pvu4g0878 494 CDD MFS_SLC45_SUC 15 470 - -
Pvu4g0878 494 Gene3D MFS general substrate transporter like domains 6 474 IPR036259 -
Pvu4g0878 494 Pfam MFS/sugar transport protein 27 279 - -
Pvu4g0878 494 SUPERFAMILY MFS general substrate transporter 11 481 IPR036259 -
Pvu4g0878 494 PANTHER SUCROSE TRANSPORT PROTEIN SUC7-RELATED 3 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g0878 Pvu-Chr4 14473427 14475717 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g0878 8 494 Sucrose Transporter Gene Family AT1G71880 63.692 0.0 615
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g0878 K15378 - gmx:100785899 801.586