Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g0877 ATGGACGAGGATCAAGAGATGGAGAGATTTGGAACGGAGAATGATTATGAGGGTGGTCAATGGATTGGTGGCGAATTCTACTACAAGAGTCGTAAAGAAAAACGCACTCAGACAAAGGATGATGTTCTTTATGGAGTTTTTGCAGATTCTGATGACGATGATGATTATTCAAGTAGAAAACGGAGGAAGGACCGTGATTTTTCAAAGAAGCCAGATCTAACAAAGCCTGTGAATTTTGTGTCTACAGGAACTTTTATGCCCAATCAGGAAATTGATAATAAGTCCAAAGAGCAGAGTGAGAGAGACGGTTATGCTAGCGAGGATAGGCCGGGGTTAGGTTTAGGTTTTGGTATGGGGTCTGGTAGCACTTCTGGGTCTGGTTTAGGTTTTAATTCTGGCAATGCTGCAAATGGTTCCGAAATAAATGATGATTCTGATGAGAATGGTCATGATAATTTCTTGCCTACAGCATTTGGGAAGAAGATTAAGGAGGGCGCAATGAGAAGGGAAAAGGAACGGGAGAAGGAGAGGTTGGAGAAGAAGAGGGGGAAGCATCAGAGTTCAGTTCAAGATGGGTCTAGTGATGTGGGGAAATTTGAGAAGCATACGAAAGGGATAGGCATGAAGTTGTTGGAGAAGATGGGTTATAAAGGAGGCGGGCTTGGGAAGAATAAGCAGGGTATTGTGGCTCCTATAGAGGCCAAATTGAGGGCCAAGAATTCTGGCATAGGGTTTAACGAGTCTAAGGAGACTATGCCATTGCCAGTTTTGCAGCAAGAGATGAAGAATGTGCAAGAGGTCTCGCAACCTGTGGTTAGCAAAACGAAGGAAAGGTTATGGTCAAAGCAAGCGAGGTTGAAGAAAAAAAAGGAGGAAGATTATATAACTGCTGAGGAGTTGTTGGCAAGCAAGCAAGAACAAGAGTTGGAGGTTGTTCAGAAGGTATATGATATGAGGGGCCCACAACTTCGGGTATTAACAAATTTGTCTGATTTGAATGCCGAGGAGAAAGCAAAAGAAAACGATATCCCTATGCCAGAACTTCAGCATAATGTAGCATTAATAGTTCGGTTGGCTGAGGCTGACATCCAAGAGATTGATAGAGATTTGAGGAGAGAGAGGGAGACGGCACTTAGCTTGAAAAAAGAAAAAGAGAAGCTAGAAACTGAGGCAGCGTTTCAGAAGAAGCAGCTGGATAATATGGAGGAAATTATGCATGTGTTAGACCATGTTGGAAAAGAAAACACTTTGGGAACATTAACATTGGATTCCCTTTCTCGTTGCTTTAGGGATTTACACAAAAGATGTGCTGATAACTACAAATTGTGTAACTTGTCATGCATTGCTTGTTCATATGCCCTACCCCTGTTTATCAGAGTGTTCCAAGGATGGGATCCTCTTCAAAATCCATCTCATGGGTTGGAGTTGGTTTCAGAGTGGAAGGGATTGCTTCAAGCAGAAGATTCATTCGATATATGGGATGTATCATCACCTTATACTCAATTGGTTTCAGAGGTTGTATTGCCAGCTATAAGAATATCTGGTATAAATACCTGGCAGGCTCGGGATCCTGAACCAATGTTACGGTTTCTGGATTTGTGGGTAAAGGATAAGTTACTTCCTCAATCAGTCCTTGCCACCATATTAGACAACATAGTTATGCCAAAACTATCAAGTGCGGTAGATACTTGGGAACCACACCATGAGGAAATTCCTATTCACACTTGGGTGCATCCATGGCTACCAATGCTGGGGCAAAAAAAGTTGGAGGGTATTTTCCAGGTGATTCGTTTTAAATTGAGTACTGTTCTTGGTGCCTGGCACCCAAGTGATGTTTCTGCTTATGCTATATTGTCTCCTTGGAAGTCTGTATTTGATCCGACTAGTTGGGAACAGCTTATGCTTCGTTTTATTGTACCAAAGTTGCAGCTTGTCTTGCAAGAGTTCCAAGTGAACCCAGCAAGTCAGAATCTTAATCAATTTTATTGGGTAATGAACTGGGCTTCTGCTATTCCTATTCACATGATGGTTGATATGATGGAGAAATTCTTCTTTTCCAAATGGCTTCAGGTTCTGTATCATTGGCTGTGCTCAAATCCTAATTTTGAAGAAGTTACAAAATGGTATTTGGGATGGAAAGAACTTATTCCAGAAGAACTGTTAGCAAATGAAAGTATCCGGTACCAGCTTAATCGCGGTCTTGATATGATGAACCAGGCTGTTGAAGGTATGGAGGTGGTCCAACCTGGTTTAAAGGAGAATATAAGCTATCTTAGGGTACTTGAGCAGAGACAATTTGAGGCTCAACAGAAAGCAGCAGCCTATGCTCAACAGCAAGCTGCTGCTAGCTTGGGTGGTGCAGTCAATGCCGATGGCACTCATGAATTGAGCTTGAAAGAAGTCATTGAGGCTCATGCTCAGCAACATGGTTTGCTATTCAAACTTAAACCTGGTAGAATGCACTATGGTCATCAAATATATGGGTTTGGTAATATCAGCATAATAATAGACTCTCTTAATCAAAAAGTATATGCCCAAAATGAAGAAACGTGGTCTATTGAATCTCTTCAAGGCTTGCTAGAGTTGCATAATAAATCCCTTAGTAAAAGGCGCTGA 2616 0.4174 MDEDQEMERFGTENDYEGGQWIGGEFYYKSRKEKRTQTKDDVLYGVFADSDDDDDYSSRKRRKDRDFSKKPDLTKPVNFVSTGTFMPNQEIDNKSKEQSERDGYASEDRPGLGLGFGMGSGSTSGSGLGFNSGNAANGSEINDDSDENGHDNFLPTAFGKKIKEGAMRREKEREKERLEKKRGKHQSSVQDGSSDVGKFEKHTKGIGMKLLEKMGYKGGGLGKNKQGIVAPIEAKLRAKNSGIGFNESKETMPLPVLQQEMKNVQEVSQPVVSKTKERLWSKQARLKKKKEEDYITAEELLASKQEQELEVVQKVYDMRGPQLRVLTNLSDLNAEEKAKENDIPMPELQHNVALIVRLAEADIQEIDRDLRRERETALSLKKEKEKLETEAAFQKKQLDNMEEIMHVLDHVGKENTLGTLTLDSLSRCFRDLHKRCADNYKLCNLSCIACSYALPLFIRVFQGWDPLQNPSHGLELVSEWKGLLQAEDSFDIWDVSSPYTQLVSEVVLPAIRISGINTWQARDPEPMLRFLDLWVKDKLLPQSVLATILDNIVMPKLSSAVDTWEPHHEEIPIHTWVHPWLPMLGQKKLEGIFQVIRFKLSTVLGAWHPSDVSAYAILSPWKSVFDPTSWEQLMLRFIVPKLQLVLQEFQVNPASQNLNQFYWVMNWASAIPIHMMVDMMEKFFFSKWLQVLYHWLCSNPNFEEVTKWYLGWKELIPEELLANESIRYQLNRGLDMMNQAVEGMEVVQPGLKENISYLRVLEQRQFEAQQKAAAYAQQQAAASLGGAVNADGTHELSLKEVIEAHAQQHGLLFKLKPGRMHYGHQIYGFGNISIIIDSLNQKVYAQNEETWSIESLQGLLELHNKSLSKRR* 872
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g0877 871 SMART G-patch_5 201 246 IPR000467 GO:0003676
Pvu4g0877 871 Coils Coil 356 404 - -
Pvu4g0877 871 MobiDBLite consensus disorder prediction 93 107 - -
Pvu4g0877 871 MobiDBLite consensus disorder prediction 33 200 - -
Pvu4g0877 871 MobiDBLite consensus disorder prediction 1 20 - -
Pvu4g0877 871 MobiDBLite consensus disorder prediction 119 142 - -
Pvu4g0877 871 Coils Coil 287 307 - -
Pvu4g0877 871 PANTHER TUFTELIN-INTERACTING PROTEIN 11-RELATED 7 857 IPR045211 GO:0000390
Pvu4g0877 871 PIRSF TFIP11 1 866 IPR024933 -
Pvu4g0877 871 Pfam Tuftelin interacting protein N terminal 4 102 IPR022159 -
Pvu4g0877 871 PANTHER TUFTELIN-INTERACTING PROTEIN 11 7 857 - -
Pvu4g0877 871 Coils Coil 168 188 - -
Pvu4g0877 871 MobiDBLite consensus disorder prediction 162 188 - -
Pvu4g0877 871 ProSiteProfiles G-patch domain profile. 203 248 IPR000467 GO:0003676
Pvu4g0877 871 Pfam GC-rich sequence DNA-binding factor-like protein 422 692 IPR022783 -
Pvu4g0877 871 MobiDBLite consensus disorder prediction 75 92 - -
Pvu4g0877 871 MobiDBLite consensus disorder prediction 52 72 - -
Pvu4g0877 871 Pfam G-patch domain 203 244 IPR000467 GO:0003676
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g0877 203 247 C2H2 Transcription Factor Family AT5G26610 46.667 8.94e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g0877 K13103 - gmx:100781621 1476.07