Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g0833 ATGGTTAGTGTAATAAAAGCAGCCATTGGAGATTTGGTGTTGACCTTCTTTTGGGTCGTGTTTTCCTCCATGTTGGGTTTGGCCACCGATGTCATAAAAACAGCTCTTGATCTTCGTCATGCGTCTTACAATGGTTTTGATTACGCTGGCGCTGTCATCATCACTTCGCTCATCTTTATCCTTGTTACCATCTTCACCTTCATTGGTAATGCCTTGGGCGGTGCCAGCTTCAACCCGACCGGTAATGCTTCATCCTACGCCGCTGGTGTTGGCGATGACACTCTTTTCTCAATGGCTCTCCGCTTCCCTGCTCAGGTACTGGGTTCAGTGGGTGGTGTTCTGGCTGTTATGGAGTATATGCCACAGAAATACAGACACTTGATTGAAGGGCCTTCTTTGAAGGTTAGCTTGCATACTGGAGCTCTAGCAGAAGGGGTGCTGACATTTGTGATCACATTTGTTGTTCTCCTCATCATGATCAAGGGTCCTCGCAGTGCCTCTGCAAAGACTTTGTTGATGGCAATCTCAACTTTGGTTTTGATCACAGTTGGTGCTACTTACACGGGACCAGCTATGAACCCTGCCTTTGCATTTGGTTGGGCATACTTTGGGAAATGGCACGACAAATGGGATCACTTCTATGTATACTGGATCTGCCCATTCGTTGGATCAATACTGGCTGCATGGCTGTTCCGTATTGTCTTTCCCCCACCACCACCAGTGGTAAAGCAGAAGAAAGCCTGA 744 0.4745 MVSVIKAAIGDLVLTFFWVVFSSMLGLATDVIKTALDLRHASYNGFDYAGAVIITSLIFILVTIFTFIGNALGGASFNPTGNASSYAAGVGDDTLFSMALRFPAQVLGSVGGVLAVMEYMPQKYRHLIEGPSLKVSLHTGALAEGVLTFVITFVVLLIMIKGPRSASAKTLLMAISTLVLITVGATYTGPAMNPAFAFGWAYFGKWHDKWDHFYVYWICPFVGSILAAWLFRIVFPPPPPVVKQKKA* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g0833 247 Pfam Major intrinsic protein 2 231 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu4g0833 247 Gene3D Glycerol uptake facilitator protein. 1 243 IPR023271 -
Pvu4g0833 247 PANTHER AQUAPORIN SIP1-1 3 246 IPR044222 GO:0015250
Pvu4g0833 247 SUPERFAMILY Aquaporin-like 3 242 IPR023271 -
Pvu4g0833 247 PRINTS Major intrinsic protein family signature 6 25 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu4g0833 247 PRINTS Major intrinsic protein family signature 58 82 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu4g0833 247 PRINTS Major intrinsic protein family signature 97 116 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu4g0833 247 PRINTS Major intrinsic protein family signature 143 161 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu4g0833 247 PRINTS Major intrinsic protein family signature 174 196 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu4g0833 247 PRINTS Major intrinsic protein family signature 214 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu4g0833 247 PANTHER AQUAPORIN SIP1-1 3 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g0833 Pvu-Chr4 13200080 13205512 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g0833 2 246 Major Intrinsic Protein MIP AT5G18290 51.220 1.15e-81 243
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g0833 K09875 - gmx:100788738 387.111
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1130 1 29347076 29349648 Pvu4g0833 4 13200080 13205512 PCT