Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g0811 ATGGAAAGGCTCCAAGGCTTTGTTGTGAAAGGGGGCATAAAATTACCAATTGGGTTCAGGTTTTGTCCCACAGATCAAGAGCTTCTCCTTCACTACCTCAAGAACAAGGCCTTTGCTCTACAATTACCTGCTTCAGTCATTTCAGACTGTGATGTGTTTCAGACTGACCCATGGTTGCTTCCAGGTGATTTGAGGGAAAAGAGGTACTTTTTTAGCAATTGTGGAAAAGTGAACAAGAAAAGTGCTGGTTCGGGTTGTTGGAAATGTGTTGGAAAAGAAAAAGAAATAAGGCGTTGTGAAAGCAACGAGGTAATTGGGATGAAGAAAACACTTATGTTCTGCAAAGGTTCTAATGACACAAGAACTCGCTGGGTCATGCACCAATTACGTCTTCTAACTTCCTACCCATATCAGATGGCAGTGGGAGATTTTGCAGTGTATGTCATATTTCAGAAAAGGAAGAAGACAAAAACATCTAACCGGAGAGTCTCTAGTAGCAGGAAACTTGAGAGAGTAGATGATGTTAAAGCTAGTATGATGGATTTTAAAGTGGAATTTGGTGATGATAATATAGAGCTTCCCCCACCTTCTTCCCCATCTTTAAGTGAAGACTGTAGTGAAACAACTTAA 630 0.4063 MERLQGFVVKGGIKLPIGFRFCPTDQELLLHYLKNKAFALQLPASVISDCDVFQTDPWLLPGDLREKRYFFSNCGKVNKKSAGSGCWKCVGKEKEIRRCESNEVIGMKKTLMFCKGSNDTRTRWVMHQLRLLTSYPYQMAVGDFAVYVIFQKRKKTKTSNRRVSSSRKLERVDDVKASMMDFKVEFGDDNIELPPPSSPSLSEDCSETT* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g0811 209 MobiDBLite consensus disorder prediction 186 209 - -
Pvu4g0811 209 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 15 158 - -
Pvu4g0811 209 ProSiteProfiles NAC domain profile. 15 152 IPR003441 GO:0003677|GO:0006355
Pvu4g0811 209 Gene3D NAC domain 24 158 IPR036093 GO:0003677|GO:0006355
Pvu4g0811 209 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 15 158 - -
Pvu4g0811 209 SUPERFAMILY NAC domain 9 152 IPR036093 GO:0003677|GO:0006355
Pvu4g0811 209 MobiDBLite consensus disorder prediction 195 209 - -
Pvu4g0811 209 Pfam No apical meristem (NAM) protein 16 131 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g0811 Pvu-Chr4 12488228 12491271 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g0811 7 169 NAC Transcription Factor Family AT5G13180 40.116 2.50e-36 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pvu4g0811 NAM 1.2e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g0811 - - vra:106767617 309.301
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0943 1 17340495 17342191 Pvu4g0811 4 12488228 12491271 PCT